Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL354976.1-201ENST00000613843 387 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 AL356490.1-201ENST00000623079 479 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.06□□□□□ -1.92
UPK1AO00322 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
UPK1AO00322 Z83843.1-201ENST00000604070 3685 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1AO00322 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1AO00322 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1AO00322 AC009501.3-201ENST00000605001 1352 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.05□□□□□ -1.92
UPK1AO00322 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
UPK1AO00322 RPS7P15-201ENST00000415804 584 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.05□□□□□ -1.92
UPK1AO00322 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.05□□□□□ -1.92
UPK1AO00322 AC097713.2-201ENST00000430199 356 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 CYCSP43-201ENST00000438233 310 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.05□□□□□ -1.92
UPK1AO00322 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.05□□□□□ -1.92
UPK1AO00322 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.05□□□□□ -1.92
UPK1AO00322 RPL21P10-201ENST00000463521 490 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 POU5F1P7-201ENST00000508759 541 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 AC005351.1-201ENST00000511152 786 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.05□□□□□ -1.92
UPK1AO00322 Vault.1-201ENST00000516474 102 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 COX6B1P6-201ENST00000522347 255 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.05□□□□□ -1.92
UPK1AO00322 CCNG2P1-201ENST00000549521 1000 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.05□□□□□ -1.92
UPK1AO00322 AC090751.1-201ENST00000566966 267 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 CBX3P2-202ENST00000583365 535 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 U6.105-201ENST00000637379 88 ntBASIC3.05□□□□□ -1.92
UPK1AO00322 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.04□□□□□ -1.92
UPK1AO00322 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UPK1AO00322 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
UPK1AO00322 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
UPK1AO00322 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.04□□□□□ -1.92
UPK1AO00322 AC021755.1-201ENST00000559747 1447 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 DCAF13P1-201ENST00000495256 1330 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UPK1AO00322 RNU6-98P-201ENST00000384173 107 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 MIR183-201ENST00000384958 110 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UPK1AO00322 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.04□□□□□ -1.92
UPK1AO00322 MTATP6P31-201ENST00000406985 692 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 MIR1303-201ENST00000408625 86 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 NDUFB4P5-201ENST00000415445 361 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 AL138799.3-201ENST00000438968 350 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 AC114878.1-201ENST00000441166 358 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 FTH1P2-201ENST00000466086 412 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 AC073522.1-201ENST00000483312 377 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.04□□□□□ -1.92
UPK1AO00322 RNU2-58P-201ENST00000516403 183 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 SNORA31.13-201ENST00000516624 135 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 HAUS1P3-201ENST00000523909 662 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.04□□□□□ -1.92
UPK1AO00322 AC011611.1-201ENST00000552179 197 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 NCAPGP2-201ENST00000557911 754 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 AC005242.1-201ENST00000585658 438 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.04□□□□□ -1.92
UPK1AO00322 AL157817.1-201ENST00000614264 790 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 AC015967.1-201ENST00000619893 476 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 MTND5P19-201ENST00000424872 1794 ntBASIC3.04□□□□□ -1.92
UPK1AO00322 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.04□□□□□ -1.92
UPK1AO00322 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
UPK1AO00322 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.03□□□□□ -1.92
UPK1AO00322 MTCO1P12-201ENST00000414273 1543 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.03□□□□□ -1.92
UPK1AO00322 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
UPK1AO00322 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
UPK1AO00322 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.03□□□□□ -1.92
UPK1AO00322 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
UPK1AO00322 AC091152.2-201ENST00000591628 2569 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
UPK1AO00322 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
UPK1AO00322 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
UPK1AO00322 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
UPK1AO00322 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
UPK1AO00322 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.03□□□□□ -1.92
UPK1AO00322 RPL32P35-201ENST00000415214 394 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.03□□□□□ -1.92
UPK1AO00322 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.03□□□□□ -1.92
UPK1AO00322 AL050321.1-201ENST00000432363 400 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
UPK1AO00322 AC097499.1-201ENST00000444277 208 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 ARL5AP2-201ENST00000444698 533 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 AC092685.1-201ENST00000447960 1243 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 RNU6-775P-201ENST00000459318 96 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 RPL37P6-202ENST00000464216 403 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.03□□□□□ -1.92
UPK1AO00322 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.03□□□□□ -1.92
UPK1AO00322 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.03□□□□□ -1.92
UPK1AO00322 AC090071.1-201ENST00000507713 644 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 RN7SKP234-201ENST00000517173 224 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 DUXAP2-201ENST00000519198 589 ntBASIC3.03□□□□□ -1.92
UPK1AO00322 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.03□□□□□ -1.92
UPK1AO00322 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
UPK1AO00322 HIGD1AP1-201ENST00000550979 275 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms