Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MTCO1P43-201ENST00000431831 488 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 RPS27P5-201ENST00000444247 244 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC104982.1-201ENST00000478775 574 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC025518.1-201ENST00000479856 347 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 RPL21P47-201ENST00000483696 477 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC069306.1-201ENST00000507006 843 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC119751.4-201ENST00000507498 357 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC112518.2-201ENST00000508565 425 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 SAP18P1-201ENST00000512058 390 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AP001207.2-201ENST00000519490 539 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 MTCO1P49-201ENST00000523429 802 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 OR4C2P-201ENST00000530855 1064 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 GTF2IP22-201ENST00000554443 182 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 YWHAZP1-201ENST00000556286 722 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC245884.10-201ENST00000597355 337 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC091057.3-201ENST00000602684 733 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC105148.1-201ENST00000604961 409 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AL365400.2-201ENST00000605604 902 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC018645.2-201ENST00000609151 472 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 uc_338.1-201ENST00000612113 180 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC139769.3-201ENST00000618383 175 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AL512427.1-201ENST00000618593 349 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AC119674.1-212ENST00000641155 993 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 DCAF13P3-201ENST00000561147 1334 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 MTND5P11-201ENST00000511037 1812 ntBASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM49D1C9J1S8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AL353746.1-201ENST00000566293 6881 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 ZNF542P-204ENST00000482727 1305 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC008432.1-201ENST00000615912 1320 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 RNU1-70P-201ENST00000362618 164 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 RNU6-925P-201ENST00000384629 104 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 SNORD17-201ENST00000390930 237 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 RN7SKP111-201ENST00000410349 271 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 LINC01881-201ENST00000416103 412 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC013262.1-201ENST00000426710 252 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AL035458.1-201ENST00000433096 585 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC011242.1-201ENST00000433596 1158 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 NOTCH2P1-201ENST00000443481 624 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC023512.1-201ENST00000444513 499 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC239367.2-201ENST00000447309 705 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 Z99127.3-201ENST00000448158 395 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 RN7SL542P-201ENST00000467147 294 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 RPL23AP44-201ENST00000482216 473 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC005726.1-201ENST00000494679 427 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 KCTD9P5-201ENST00000504141 1170 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 RN7SKP13-201ENST00000515933 244 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 RNA5SP217-201ENST00000515959 91 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 RNU6-1004P-201ENST00000516584 111 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC103843.2-201ENST00000530523 682 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC025260.1-201ENST00000548858 430 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC096947.1-201ENST00000603233 470 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC090525.3-201ENST00000605601 189 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC245100.7-201ENST00000609678 442 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC078880.5-201ENST00000617845 421 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC007275.1-201ENST00000621243 671 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AL356321.1-201ENST00000621360 228 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AL356863.1-201ENST00000623378 1080 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 AL365440.1-201ENST00000436135 2167 ntBASIC3.31□□□□□ -1.88
TRIM49D1C9J1S8 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 RNA5SP119-201ENST00000362715 117 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 SNORD56.4-201ENST00000363883 71 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 RNU6-207P-201ENST00000384137 107 ntBASIC3.3□□□□□ -1.88
TRIM49D1C9J1S8 RNU6-452P-201ENST00000384406 107 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms