Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 Z99127.3-201ENST00000448158 395 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AC096992.1-201ENST00000459808 709 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AC092754.2-201ENST00000463506 460 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 OR9N1P-202ENST00000494289 481 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AC108078.3-201ENST00000502633 489 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AC006499.5-201ENST00000505037 514 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 HMGB3P15-201ENST00000507326 574 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 IGHV3-76-201ENST00000522465 295 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 HAUS1P3-201ENST00000523909 662 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 SYF2P1-201ENST00000550658 413 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AC090616.5-202ENST00000582111 297 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AC011492.1-201ENST00000600023 315 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AL020997.2-201ENST00000602607 184 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 CR589904.2-201ENST00000612533 440 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 SNORA50A-202ENST00000629536 136 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AC022031.1-201ENST00000585985 2593 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 ZNF826P-207ENST00000622273 1910 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC234772.1-201ENST00000377927 937 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 RNU6-40P-201ENST00000384254 107 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 PTMAP2-201ENST00000397627 327 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 RPL23AP47-201ENST00000408017 460 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 RNU4-74P-201ENST00000411280 161 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC008155.2-201ENST00000464337 397 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 VN1R17P-201ENST00000472048 1090 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 RPL7P38-201ENST00000488396 739 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 APOOP4-201ENST00000513530 597 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 RNU1-143P-201ENST00000516296 146 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AL163153.1-201ENST00000554223 283 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 MIR4276-201ENST00000584832 70 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 U3.45-201ENST00000607547 219 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC092354.2-201ENST00000607786 514 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 U1.23-201ENST00000610293 146 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 RNU1-68P-201ENST00000615382 146 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AL355365.1-201ENST00000616480 294 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 U1.39-201ENST00000621562 146 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.29□□□□□ -1.88
TREX1Q9NSU2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TREX1Q9NSU2 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 RPL7P26-201ENST00000333817 754 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 AC083799.1-201ENST00000366451 910 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 AL355379.1-201ENST00000405542 640 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 BX323014.1-201ENST00000412876 237 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 HMGN2P20-201ENST00000437531 273 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 AC114878.1-201ENST00000441166 358 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 PDSS1P2-201ENST00000449397 678 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 NF1P3-201ENST00000457709 450 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 RPL23AP14-201ENST00000468281 468 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 OR8I1P-201ENST00000529291 931 ntBASIC3.28□□□□□ -1.88
TREX1Q9NSU2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.28□□□□□ -1.88
TREX1Q9NSU2 MIR3690-201ENST00000580266 75 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms