Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RPL23AP29-201ENST00000397284 453 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 SNORA11F-201ENST00000408237 128 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 SNRPFP1-201ENST00000414761 252 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AL590139.1-201ENST00000416267 400 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 EI24P1-201ENST00000416584 867 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AL356387.2-201ENST00000422272 243 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AL022400.1-201ENST00000423946 935 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 RPS6P12-201ENST00000432491 726 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AL772161.1-201ENST00000439130 476 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AL591503.2-201ENST00000442314 1005 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 ARL2BPP10-201ENST00000446487 531 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 OR6K5P-201ENST00000447050 945 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC079804.1-201ENST00000461922 436 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 RPL5P23-201ENST00000496040 868 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC010486.2-201ENST00000505572 483 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC023141.12-201ENST00000512399 199 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 HNRNPKP5-201ENST00000515300 253 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 RPL26P30-202ENST00000602923 645 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC006329.2-201ENST00000611491 394 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 Z99129.2-201ENST00000619967 314 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC012020.1-201ENST00000624541 1728 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 DDX43P2-201ENST00000604753 1354 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC008033.1-201ENST00000216407 1162 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 Y_RNA.169-201ENST00000363745 96 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 MIR129-1-201ENST00000384972 72 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 RSL24D1P4-201ENST00000400938 484 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AL139095.3-201ENST00000419672 1203 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC011233.1-201ENST00000422812 283 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 BRWD1P3-201ENST00000428816 390 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 USP9YP7-201ENST00000436723 430 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 MTND5P2-201ENST00000442927 1142 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 USP9YP32-201ENST00000452432 430 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 SUMO2P2-201ENST00000456482 255 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 RPL7AP28-201ENST00000464513 571 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 RPL35AP15-201ENST00000468042 339 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC090453.1-201ENST00000495560 436 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC006499.2-201ENST00000513470 337 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 CYP4A43P-201ENST00000568156 121 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 MIR4999-201ENST00000585029 91 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC024940.4-201ENST00000605507 246 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 VIS1.1-201ENST00000610517 203 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC025588.4-201ENST00000615802 908 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC009237.17-201ENST00000618111 748 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 uc_338.13-201ENST00000618243 179 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 AC079228.1-201ENST00000624774 1049 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 MTND5P24-201ENST00000438892 1767 ntBASIC4.16□□□□□ -1.74
BRF2Q9HAW0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
BRF2Q9HAW0 MTND4P26-201ENST00000415971 1359 ntBASIC4.15□□□□□ -1.74
BRF2Q9HAW0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
BRF2Q9HAW0 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
BRF2Q9HAW0 AP002907.1-201ENST00000606361 1430 ntBASIC4.15□□□□□ -1.74
BRF2Q9HAW0 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.15□□□□□ -1.74
BRF2Q9HAW0 OR4G11P-202ENST00000642116 1414 ntBASIC4.15□□□□□ -1.74
BRF2Q9HAW0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 253 ms