Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC093151.1-201ENST00000427711 313 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 NPM1P24-201ENST00000428039 894 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 RPL7P59-201ENST00000447700 943 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 DNAJC19P8-201ENST00000452887 259 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 RPL21P18-201ENST00000469899 480 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 RPS3AP14-201ENST00000483907 780 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM4Q9C037 TMEM248P1-201ENST00000510579 951 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 RNU2-27P-201ENST00000516185 142 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 RNU6-579P-201ENST00000516879 102 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 AC006504.3-201ENST00000586818 523 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 AC090425.2-201ENST00000608818 501 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 AL162274.2-201ENST00000614406 332 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 AL732618.1-201ENST00000623251 301 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM4Q9C037 AC007823.1-201ENST00000569932 1566 ntBASIC3.41□□□□□ -1.86
TRIM4Q9C037 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM4Q9C037 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
TRIM4Q9C037 AC007256.1-201ENST00000392253 2765 ntBASIC3.4□□□□□ -1.86
TRIM4Q9C037 AL356274.2-201ENST00000624379 3752 ntBASIC3.4□□□□□ -1.86
TRIM4Q9C037 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM4Q9C037 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM4Q9C037 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TRIM4Q9C037 ZNF807-201ENST00000328088 1707 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 RNU6-167P-201ENST00000384292 106 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 AL031121.1-201ENST00000406553 254 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 RPL5P18-201ENST00000406671 891 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 OR1AA1P-201ENST00000419597 916 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM4Q9C037 AC244505.4-201ENST00000434905 287 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM4Q9C037 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM4Q9C037 SSXP5-201ENST00000443473 287 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 GAPDHP27-201ENST00000447427 1020 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM4Q9C037 VN1R48P-201ENST00000448149 1036 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 RAB28P3-201ENST00000448325 597 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 ARPC3P2-201ENST00000457786 533 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 RPL23AP12-201ENST00000467573 473 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 HMGB3P14-201ENST00000494195 599 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 AC005921.1-201ENST00000510589 286 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM4Q9C037 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM4Q9C037 AL121766.1-201ENST00000547436 487 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 AL163153.1-201ENST00000554223 283 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 AC034268.2-201ENST00000571784 482 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM4Q9C037 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM4Q9C037 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM4Q9C037 SNORA35B-201ENST00000607417 129 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM4Q9C037 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM4Q9C037 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM4Q9C037 AC092184.1-201ENST00000625042 715 ntBASIC3.4□□□□□ -1.87
TRIM4Q9C037 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM4Q9C037 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM4Q9C037 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM4Q9C037 AL365440.1-201ENST00000436135 2167 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM4Q9C037 SNORA31-201ENST00000362607 130 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 RNA5SP374-201ENST00000362939 125 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 HSFY4P-201ENST00000415994 1181 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM4Q9C037 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM4Q9C037 RPL30P3-201ENST00000424262 333 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM4Q9C037 MTCO1P43-201ENST00000431831 488 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 AC091862.1-201ENST00000438016 1100 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM4Q9C037 AC025750.2-201ENST00000442609 450 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM4Q9C037 AC233982.1-201ENST00000451247 436 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 AC073522.1-201ENST00000483312 377 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 ATG10-AS1-201ENST00000504846 648 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM4Q9C037 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.39□□□□□ -1.87
TRIM4Q9C037 AC027281.1-201ENST00000574178 758 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 MIR5186-201ENST00000577504 120 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 MIR4325-201ENST00000583049 90 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM4Q9C037 AC125494.3-201ENST00000602759 455 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 YPEL5P2-201ENST00000605553 359 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 MIR7112-201ENST00000616126 65 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 AC007998.5-201ENST00000622938 237 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 AC019080.5-201ENST00000624891 757 ntBASIC3.39□□□□□ -1.87
TRIM4Q9C037 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM4Q9C037 ELL2P4-201ENST00000446870 1376 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms