Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 GTF2IP8-201ENST00000560687 584 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 SULT1C2P1-202ENST00000562418 459 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 MIR5047-201ENST00000579212 100 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 AC023575.1-201ENST00000580510 358 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 RN7SL339P-201ENST00000580597 296 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX3Q99909 AC245884.10-201ENST00000597355 337 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 XIAPP1-201ENST00000603162 600 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 AC103881.1-201ENST00000603476 538 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 AC069545.1-201ENST00000605671 358 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 DUXAP10-204ENST00000612052 616 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SSX3Q99909 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SSX3Q99909 AC073968.1-201ENST00000618594 637 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 AL158163.2-201ENST00000619110 700 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 AC091905.2-201ENST00000623143 306 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 AC006963.1-201ENST00000624003 1052 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 OR4G3P-201ENST00000633500 913 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SSX3Q99909 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SSX3Q99909 AC007256.1-201ENST00000392253 2765 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSX3Q99909 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.58□□□□□ -1.84
SSX3Q99909 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.58□□□□□ -1.84
SSX3Q99909 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
SSX3Q99909 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 AC130650.2-201ENST00000618736 2403 ntBASIC3.58□□□□□ -1.84
SSX3Q99909 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SSX3Q99909 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSX3Q99909 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSX3Q99909 AL353746.1-201ENST00000566293 6881 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSX3Q99909 OR5P1P-201ENST00000299512 925 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 FAM3C2-201ENST00000312214 681 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SSX3Q99909 SNORA70.2-201ENST00000364506 135 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSX3Q99909 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SSX3Q99909 SNORA40.2-201ENST00000390847 128 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 MTND4LP20-201ENST00000402379 270 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 RPL23AP47-201ENST00000408017 460 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX3Q99909 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSX3Q99909 RNA5SP129-201ENST00000410276 118 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 RPS20P14-201ENST00000412545 360 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSX3Q99909 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX3Q99909 GTF2IP23-201ENST00000423746 351 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 SDCBPP2-201ENST00000424643 885 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX3Q99909 ARF4P2-201ENST00000430209 526 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC127537.2-201ENST00000439258 465 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX3Q99909 AL645638.1-201ENST00000440519 361 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 OR10R1P-201ENST00000441524 1141 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX3Q99909 MTCO1P48-201ENST00000448024 1096 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX3Q99909 RPS24P6-201ENST00000452670 400 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 AC013828.1-201ENST00000481845 158 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 RPL23AP44-201ENST00000482216 473 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX3Q99909 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSX3Q99909 AC017037.1-201ENST00000508460 471 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSX3Q99909 AC004062.1-201ENST00000509926 645 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC087808.1-201ENST00000520501 361 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX3Q99909 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.57□□□□□ -1.84
SSX3Q99909 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.57□□□□□ -1.84
SSX3Q99909 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX3Q99909 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC107982.3-201ENST00000584957 985 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX3Q99909 IPO5P1-202ENST00000600039 287 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 AC021749.1-201ENST00000604322 607 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 MIR432-201ENST00000606207 94 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC024257.5-201ENST00000612739 531 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 AC114781.5-201ENST00000615297 108 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.57□□□□□ -1.84
SSX3Q99909 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SSX3Q99909 LINC02211-204ENST00000642024 1070 ntBASIC3.57□□□□□ -1.84
SSX3Q99909 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSX3Q99909 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms