Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC087883.1-201ENST00000551882 391 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC079075.1-201ENST00000559543 878 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC137800.2-201ENST00000574375 120 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 MIR4801-201ENST00000582704 82 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 MIR4307-201ENST00000582802 84 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC011477.5-201ENST00000586571 259 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC015871.5-202ENST00000623252 701 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AL603839.4-201ENST00000624658 1005 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC007529.1-201ENST00000418574 2178 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC012618.3-205ENST00000637896 1496 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 SMG1P4-204ENST00000523028 4131 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC107068.1-201ENST00000563286 4218 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC125257.1-201ENST00000560400 2930 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC006378.2-201ENST00000623178 2476 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 RNU6-952P-201ENST00000391164 108 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AL359643.1-201ENST00000404109 423 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AL024474.1-201ENST00000404655 591 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AL080315.1-201ENST00000406055 466 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 TPMTP2-201ENST00000414372 726 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AL590139.1-201ENST00000416267 400 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 RPL12P34-201ENST00000424532 479 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC109583.1-201ENST00000432156 268 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AL359265.2-201ENST00000434367 631 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 MTND1P1-201ENST00000445453 368 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 OR6K1P-201ENST00000456766 971 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC138853.1-201ENST00000503549 823 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC022878.1-201ENST00000530684 149 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC009063.1-201ENST00000563342 702 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC015912.2-201ENST00000571053 181 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 MIR4270-201ENST00000581799 70 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC008250.2-201ENST00000615261 205 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AC025588.4-201ENST00000615802 908 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 SEPT14P19-203ENST00000633205 211 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 MFSD8-216ENST00000641147 4009 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 AL022578.1-201ENST00000439330 1433 ntBASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTHRC1Q96CG8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CTHRC1Q96CG8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms