Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RPS27AP13-201ENST00000498403 237 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC108941.1-201ENST00000502853 530 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC026784.1-201ENST00000507986 352 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 ARL2BPP6-201ENST00000512757 439 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 RNA5SP164-201ENST00000516533 110 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 SCARNA1-201ENST00000517138 166 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC091163.3-201ENST00000518269 1144 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AP001207.1-201ENST00000524051 481 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC008489.1-201ENST00000524271 483 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 NDUFS5P6-201ENST00000529136 295 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AL163153.1-201ENST00000554223 283 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 BNIP3P40-201ENST00000596017 556 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 IPO5P1-202ENST00000600039 287 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC096947.1-201ENST00000603233 470 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC119501.1-201ENST00000603646 475 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC073387.2-201ENST00000604797 784 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AL009028.1-201ENST00000604895 802 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC091167.4-201ENST00000605079 184 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AP000240.1-201ENST00000609910 452 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC006023.2-201ENST00000609916 167 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 MIR8059-201ENST00000620427 81 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AC068620.4-201ENST00000636730 1182 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 AL672296.1-201ENST00000427780 2158 ntBASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCDC71LQ8N9Z2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC71LQ8N9Z2 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.15□□□□□ -1.9
CCDC71LQ8N9Z2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC71LQ8N9Z2 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-1226P-201ENST00000384317 107 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-549P-201ENST00000384433 107 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 SNORA48.8-201ENST00000391324 134 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AL355379.1-201ENST00000405542 640 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 USP9YP21-201ENST00000420603 432 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AL590103.1-201ENST00000434488 307 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC006480.1-201ENST00000449887 378 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 Z99714.1-201ENST00000450463 807 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC099563.1-201ENST00000456086 418 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC104164.3-201ENST00000467363 1258 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 VN1R17P-201ENST00000472048 1090 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC041039.1-201ENST00000485656 536 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC096571.1-202ENST00000506634 735 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC118282.2-201ENST00000508739 374 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC048346.1-201ENST00000510247 144 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC008837.1-201ENST00000511513 412 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 RN7SKP60-201ENST00000516985 239 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-1028P-201ENST00000517164 93 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 IGKV2D-36-201ENST00000518643 226 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 MIR4425-201ENST00000580572 84 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC022069.1-201ENST00000582910 658 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 MIR4715-201ENST00000584117 79 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC006116.5-201ENST00000591936 559 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AP001542.2-201ENST00000593141 364 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC091057.3-201ENST00000602684 733 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AL163642.2-201ENST00000604722 1019 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC105148.1-201ENST00000604961 409 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC016877.3-201ENST00000606778 504 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AP000238.1-201ENST00000608759 426 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 VN1R7P-201ENST00000619242 903 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC098679.5-201ENST00000624394 571 ntBASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC71LQ8N9Z2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms