Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 Y_RNA.25-201ENST00000362528 102 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 RN7SKP280-201ENST00000364196 304 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC244098.2-201ENST00000422068 99 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC006011.1-201ENST00000442758 349 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 RPL21P89-201ENST00000444021 467 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 KLRA1P-201ENST00000503499 986 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 MTND4LP31-201ENST00000514859 294 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 RNU2-58P-201ENST00000516403 183 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC010928.3-201ENST00000587712 541 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC091946.2-201ENST00000606105 291 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AL157392.4-201ENST00000609756 345 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC005332.6-201ENST00000613178 446 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC008083.4-201ENST00000615076 444 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC004825.2-201ENST00000616634 455 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 CYCSP41-201ENST00000616920 296 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 MIR7151-201ENST00000617477 60 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC034229.5-201ENST00000624258 185 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 AC092184.1-201ENST00000625042 715 ntBASIC4.2□□□□□ -1.74
PRPF39Q86UA1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 RNU6-761P-201ENST00000384148 107 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 SNORA51.6-201ENST00000384151 125 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 Y_RNA.472-201ENST00000384322 102 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 MIR134-201ENST00000385258 73 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 RPL21P65-201ENST00000406094 466 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 SNORA3C-201ENST00000408792 125 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AL513174.1-201ENST00000423182 629 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 HSFY1P1-201ENST00000423928 1178 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 RPL7P2-201ENST00000427639 268 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AC127537.2-201ENST00000439258 465 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 TVP23BP2-201ENST00000455082 615 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AC092757.1-201ENST00000467293 467 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 RN7SL132P-201ENST00000478131 296 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 RN7SL604P-201ENST00000492589 296 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 OR5H5P-201ENST00000503164 928 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 SCARNA1-201ENST00000517138 166 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 RNU6-1261P-201ENST00000517194 104 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 IGKV2-38-201ENST00000517443 247 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 MTND1P6-201ENST00000523621 946 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 SNRPGP15-201ENST00000600149 222 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AC024257.5-201ENST00000612739 531 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AL158163.2-201ENST00000619110 700 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 AL359715.5-201ENST00000623431 443 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 MKKS-204ENST00000639674 192 ntBASIC4.19□□□□□ -1.74
PRPF39Q86UA1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.19□□□□□ -1.74
PRPF39Q86UA1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms