Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AC004552.1-201ENST00000419089 348 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AC027644.1-201ENST00000419595 298 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 MTCYBP24-201ENST00000420387 1106 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 MTND2P9-201ENST00000422293 931 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 RPP40P1-201ENST00000426762 456 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 HIGD1AP12-201ENST00000427832 281 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AC091286.1-201ENST00000431233 461 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LIMK1P53667 RPL23AP46-201ENST00000438548 490 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 RPS26P56-201ENST00000444468 240 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 HMGB1P16-201ENST00000447155 540 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 FTH1P25-201ENST00000447665 469 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AC104978.1-201ENST00000449387 391 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AL451050.1-201ENST00000450126 415 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 DUXAP8-207ENST00000456786 622 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 RPL23AP62-201ENST00000463396 453 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 RPS26P3-201ENST00000470205 348 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AC087879.1-201ENST00000474343 374 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.12□□□□□ -1.75
LIMK1P53667 AC090543.2-201ENST00000483963 348 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AC004057.1-201ENST00000485827 348 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 RPS26P15-201ENST00000488067 348 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LIMK1P53667 AC139783.2-201ENST00000504847 1145 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 HIGD1AP3-201ENST00000515857 278 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.12□□□□□ -1.75
LIMK1P53667 OR7E13P-201ENST00000526052 910 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LIMK1P53667 OR8K4P-201ENST00000534608 872 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
LIMK1P53667 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.12□□□□□ -1.75
LIMK1P53667 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.12□□□□□ -1.75
LIMK1P53667 AGGF1P8-201ENST00000562979 1000 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.12□□□□□ -1.75
LIMK1P53667 CYP4A43P-201ENST00000568156 121 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.12□□□□□ -1.75
LIMK1P53667 AC074051.3-201ENST00000570238 358 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AC120057.2-201ENST00000571520 271 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.12□□□□□ -1.75
LIMK1P53667 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.12□□□□□ -1.75
LIMK1P53667 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.12□□□□□ -1.75
LIMK1P53667 AL354760.1-201ENST00000608357 643 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 AC009237.15-201ENST00000610252 501 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 DUXAP10-204ENST00000612052 616 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.12□□□□□ -1.75
LIMK1P53667 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LIMK1P53667 SAGE4P-201ENST00000442271 3381 ntBASIC4.12□□□□□ -1.75
LIMK1P53667 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.12□□□□□ -1.75
LIMK1P53667 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LIMK1P53667 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LIMK1P53667 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
LIMK1P53667 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
LIMK1P53667 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.11□□□□□ -1.75
LIMK1P53667 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LIMK1P53667 SNORA51.2-201ENST00000364595 132 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 AL133264.1-201ENST00000407157 562 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 Z92545.1-201ENST00000411782 234 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 RPL31P2-201ENST00000413849 377 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 BOLA3P4-201ENST00000418151 400 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 MTND2P16-201ENST00000419987 799 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMK1P53667 AC062016.2-201ENST00000420950 676 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 AC244098.2-201ENST00000422068 99 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.11□□□□□ -1.75
LIMK1P53667 MTCO2P23-201ENST00000425216 680 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMK1P53667 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LIMK1P53667 AC017083.1-201ENST00000428093 483 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.11□□□□□ -1.75
LIMK1P53667 AC092393.1-201ENST00000439625 742 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.11□□□□□ -1.75
LIMK1P53667 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMK1P53667 RPL21P131-201ENST00000497298 483 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 UBE2V1P12-201ENST00000503954 474 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMK1P53667 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMK1P53667 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.11□□□□□ -1.75
LIMK1P53667 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMK1P53667 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMK1P53667 MTCYBP28-201ENST00000566728 1132 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 AC009101.1-201ENST00000568135 242 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 MIR5195-201ENST00000583555 115 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.11□□□□□ -1.75
LIMK1P53667 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.11□□□□□ -1.75
LIMK1P53667 AC090181.2-201ENST00000602975 672 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 YWHAQP7-201ENST00000603536 658 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 AL157392.4-201ENST00000609756 345 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.11□□□□□ -1.75
LIMK1P53667 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.11□□□□□ -1.75
LIMK1P53667 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.11□□□□□ -1.75
LIMK1P53667 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.11□□□□□ -1.75
LIMK1P53667 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.11□□□□□ -1.75
LIMK1P53667 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LIMK1P53667 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LIMK1P53667 AC097504.1-201ENST00000515103 2415 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 AL031985.3-201ENST00000565390 2449 ntBASIC4.11□□□□□ -1.75
LIMK1P53667 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms