Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP11P51784 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP11P51784 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.94□□□□□ -1.46
USP11P51784 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP11P51784 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP11P51784 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP11P51784 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
USP11P51784 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USP11P51784 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
USP11P51784 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USP11P51784 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
USP11P51784 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.93□□□□□ -1.46
USP11P51784 AC002525.1-201ENST00000624392 1622 ntBASIC5.93□□□□□ -1.46
USP11P51784 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.93□□□□□ -1.46
USP11P51784 SNORA4.3-201ENST00000365564 137 ntBASIC5.93□□□□□ -1.46
USP11P51784 Y_RNA.579-201ENST00000390939 94 ntBASIC5.93□□□□□ -1.46
USP11P51784 RNU6-1158P-201ENST00000391167 107 ntBASIC5.93□□□□□ -1.46
USP11P51784 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 RN7SKP140-201ENST00000411196 284 ntBASIC5.93□□□□□ -1.46
USP11P51784 SNRPFP1-201ENST00000414761 252 ntBASIC5.93□□□□□ -1.46
USP11P51784 OR1AA1P-201ENST00000419597 916 ntBASIC5.93□□□□□ -1.46
USP11P51784 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.93□□□□□ -1.46
USP11P51784 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.93□□□□□ -1.46
USP11P51784 CBX1P2-201ENST00000453841 458 ntBASIC5.93□□□□□ -1.46
USP11P51784 SNORD19B-201ENST00000459623 84 ntBASIC5.93□□□□□ -1.46
USP11P51784 AC130509.1-201ENST00000464158 433 ntBASIC5.93□□□□□ -1.46
USP11P51784 AC063943.1-201ENST00000465434 453 ntBASIC5.93□□□□□ -1.46
USP11P51784 AC009127.1-201ENST00000467090 155 ntBASIC5.93□□□□□ -1.46
USP11P51784 AC098976.1-201ENST00000513014 541 ntBASIC5.93□□□□□ -1.46
USP11P51784 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.93□□□□□ -1.46
USP11P51784 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.93□□□□□ -1.46
USP11P51784 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.93□□□□□ -1.46
USP11P51784 SCOCP1-201ENST00000554676 349 ntBASIC5.93□□□□□ -1.46
USP11P51784 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.93□□□□□ -1.46
USP11P51784 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.93□□□□□ -1.46
USP11P51784 MIR3668-201ENST00000582138 75 ntBASIC5.93□□□□□ -1.46
USP11P51784 AC090312.2-201ENST00000582687 378 ntBASIC5.93□□□□□ -1.46
USP11P51784 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.93□□□□□ -1.46
USP11P51784 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 AC233309.1-201ENST00000619522 751 ntBASIC5.93□□□□□ -1.46
USP11P51784 AC099494.2-201ENST00000623371 978 ntBASIC5.93□□□□□ -1.46
USP11P51784 AC138965.3-201ENST00000623875 498 ntBASIC5.93□□□□□ -1.46
USP11P51784 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 AC066616.2-201ENST00000559334 1481 ntBASIC5.93□□□□□ -1.46
USP11P51784 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.93□□□□□ -1.46
USP11P51784 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
USP11P51784 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
USP11P51784 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.93□□□□□ -1.46
USP11P51784 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP11P51784 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP11P51784 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.92□□□□□ -1.46
USP11P51784 AC107021.2-201ENST00000567714 2095 ntBASIC5.92□□□□□ -1.46
USP11P51784 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.92□□□□□ -1.46
USP11P51784 NUP58P1-201ENST00000502546 1738 ntBASIC5.92□□□□□ -1.46
USP11P51784 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP11P51784 IGKV7-3-201ENST00000357453 298 ntBASIC5.92□□□□□ -1.46
USP11P51784 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP11P51784 RNU6-289P-201ENST00000364093 107 ntBASIC5.92□□□□□ -1.46
USP11P51784 SNORA33.2-201ENST00000365413 134 ntBASIC5.92□□□□□ -1.46
USP11P51784 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP11P51784 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP11P51784 RNA5SP187-201ENST00000384400 119 ntBASIC5.92□□□□□ -1.46
USP11P51784 MT-TR-201ENST00000387439 65 ntBASIC5.92□□□□□ -1.46
USP11P51784 MIR320B1-201ENST00000390209 79 ntBASIC5.92□□□□□ -1.46
USP11P51784 TXNP7-201ENST00000406296 293 ntBASIC5.92□□□□□ -1.46
USP11P51784 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.92□□□□□ -1.46
USP11P51784 RNU4-34P-201ENST00000410431 124 ntBASIC5.92□□□□□ -1.46
USP11P51784 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.92□□□□□ -1.46
USP11P51784 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.92□□□□□ -1.46
USP11P51784 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.92□□□□□ -1.46
USP11P51784 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.92□□□□□ -1.46
USP11P51784 AL627308.1-201ENST00000435693 821 ntBASIC5.92□□□□□ -1.46
USP11P51784 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.92□□□□□ -1.46
USP11P51784 AC005532.2-201ENST00000467154 373 ntBASIC5.92□□□□□ -1.46
USP11P51784 HIGD1AP6-201ENST00000521833 279 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms