Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNU6-55P-201ENST00000411092 107 ntBASIC3.68□□□□□ -1.82
CASP4P49662 RNU6-954P-201ENST00000411355 107 ntBASIC3.68□□□□□ -1.82
CASP4P49662 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.68□□□□□ -1.82
CASP4P49662 AC126124.2-201ENST00000413542 321 ntBASIC3.68□□□□□ -1.82
CASP4P49662 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CASP4P49662 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CASP4P49662 AC008264.1-201ENST00000447612 367 ntBASIC3.68□□□□□ -1.82
CASP4P49662 PDSS1P2-201ENST00000449397 678 ntBASIC3.68□□□□□ -1.82
CASP4P49662 AL353718.1-201ENST00000451028 517 ntBASIC3.68□□□□□ -1.82
CASP4P49662 HMGB3P30-201ENST00000457863 606 ntBASIC3.68□□□□□ -1.82
CASP4P49662 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.68□□□□□ -1.82
CASP4P49662 AC004801.2-202ENST00000463559 283 ntBASIC3.68□□□□□ -1.82
CASP4P49662 AC146507.1-201ENST00000468335 354 ntBASIC3.68□□□□□ -1.82
CASP4P49662 AC126121.1-201ENST00000482313 553 ntBASIC3.68□□□□□ -1.82
CASP4P49662 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.68□□□□□ -1.82
CASP4P49662 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.68□□□□□ -1.82
CASP4P49662 AC112198.1-201ENST00000505369 1220 ntBASIC3.68□□□□□ -1.82
CASP4P49662 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.68□□□□□ -1.82
CASP4P49662 AC104108.1-201ENST00000509930 412 ntBASIC3.68□□□□□ -1.82
CASP4P49662 AC133963.2-201ENST00000513686 578 ntBASIC3.68□□□□□ -1.82
CASP4P49662 MTCO1P30-201ENST00000515244 580 ntBASIC3.68□□□□□ -1.82
CASP4P49662 AC107934.2-201ENST00000518653 310 ntBASIC3.68□□□□□ -1.82
CASP4P49662 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.68□□□□□ -1.82
CASP4P49662 AL139174.1-201ENST00000531489 886 ntBASIC3.68□□□□□ -1.82
CASP4P49662 OSBPL9P3-201ENST00000534523 595 ntBASIC3.68□□□□□ -1.82
CASP4P49662 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.68□□□□□ -1.82
CASP4P49662 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.68□□□□□ -1.82
CASP4P49662 ATP5F1P7-201ENST00000567330 760 ntBASIC3.68□□□□□ -1.82
CASP4P49662 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.68□□□□□ -1.82
CASP4P49662 AC006270.2-201ENST00000578523 652 ntBASIC3.68□□□□□ -1.82
CASP4P49662 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.68□□□□□ -1.82
CASP4P49662 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.68□□□□□ -1.82
CASP4P49662 AL671309.1-201ENST00000603750 544 ntBASIC3.68□□□□□ -1.82
CASP4P49662 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.68□□□□□ -1.82
CASP4P49662 AC018926.3-201ENST00000618841 406 ntBASIC3.68□□□□□ -1.82
CASP4P49662 MIR4496-201ENST00000635896 61 ntBASIC3.68□□□□□ -1.82
CASP4P49662 OR8B1P-202ENST00000641132 1178 ntBASIC3.68□□□□□ -1.82
CASP4P49662 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CASP4P49662 AL133383.2-201ENST00000622958 2336 ntBASIC3.68□□□□□ -1.82
CASP4P49662 AC058791.1-201ENST00000608412 3198 ntBASIC3.68□□□□□ -1.82
CASP4P49662 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CASP4P49662 USP8P1-201ENST00000494673 3183 ntBASIC3.67□□□□□ -1.82
CASP4P49662 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CASP4P49662 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CASP4P49662 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CASP4P49662 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CASP4P49662 RNU6-1339P-201ENST00000363574 91 ntBASIC3.67□□□□□ -1.82
CASP4P49662 RNU6-650P-201ENST00000365658 111 ntBASIC3.67□□□□□ -1.82
CASP4P49662 RNU6-1293P-201ENST00000384077 107 ntBASIC3.67□□□□□ -1.82
CASP4P49662 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.67□□□□□ -1.82
CASP4P49662 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CASP4P49662 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.67□□□□□ -1.82
CASP4P49662 RPS15AP40-201ENST00000419621 391 ntBASIC3.67□□□□□ -1.82
CASP4P49662 BX679664.1-201ENST00000434429 253 ntBASIC3.67□□□□□ -1.82
CASP4P49662 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.67□□□□□ -1.82
CASP4P49662 AL138799.3-201ENST00000438968 350 ntBASIC3.67□□□□□ -1.82
CASP4P49662 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.67□□□□□ -1.82
CASP4P49662 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.67□□□□□ -1.82
CASP4P49662 AC089999.1-201ENST00000460336 374 ntBASIC3.67□□□□□ -1.82
CASP4P49662 AC010401.1-201ENST00000463867 348 ntBASIC3.67□□□□□ -1.82
CASP4P49662 RPS4XP10-201ENST00000465034 731 ntBASIC3.67□□□□□ -1.82
CASP4P49662 RPL7L1P8-201ENST00000469911 741 ntBASIC3.67□□□□□ -1.82
CASP4P49662 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.67□□□□□ -1.82
CASP4P49662 AC092451.1-201ENST00000480211 153 ntBASIC3.67□□□□□ -1.82
CASP4P49662 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CASP4P49662 AC093663.1-201ENST00000497190 394 ntBASIC3.67□□□□□ -1.82
CASP4P49662 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.67□□□□□ -1.82
CASP4P49662 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.67□□□□□ -1.82
CASP4P49662 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.67□□□□□ -1.82
CASP4P49662 MIR5186-201ENST00000577504 120 ntBASIC3.67□□□□□ -1.82
CASP4P49662 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.67□□□□□ -1.82
CASP4P49662 ZNF92P2-201ENST00000600543 1059 ntBASIC3.67□□□□□ -1.82
CASP4P49662 AL034351.1-201ENST00000605288 668 ntBASIC3.67□□□□□ -1.82
CASP4P49662 AC022079.2-201ENST00000619739 566 ntBASIC3.67□□□□□ -1.82
CASP4P49662 RNU6-156P-201ENST00000621869 107 ntBASIC3.67□□□□□ -1.82
CASP4P49662 AC110801.1-201ENST00000623590 212 ntBASIC3.67□□□□□ -1.82
CASP4P49662 AP003400.6-201ENST00000624698 740 ntBASIC3.67□□□□□ -1.82
CASP4P49662 AC092608.3-201ENST00000625017 386 ntBASIC3.67□□□□□ -1.82
CASP4P49662 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CASP4P49662 DCAF13P1-201ENST00000495256 1330 ntBASIC3.67□□□□□ -1.82
CASP4P49662 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
CASP4P49662 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CASP4P49662 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CASP4P49662 AL021368.2-201ENST00000606125 5352 ntBASIC3.66□□□□□ -1.82
CASP4P49662 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CASP4P49662 AC011978.2-201ENST00000569835 2054 ntBASIC3.66□□□□□ -1.82
CASP4P49662 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CASP4P49662 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CASP4P49662 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.66□□□□□ -1.82
CASP4P49662 RNU1-70P-201ENST00000362618 164 ntBASIC3.66□□□□□ -1.82
CASP4P49662 RNA5SP119-201ENST00000362715 117 ntBASIC3.66□□□□□ -1.82
CASP4P49662 MIR183-201ENST00000384958 110 ntBASIC3.66□□□□□ -1.82
CASP4P49662 MIR449B-201ENST00000384995 97 ntBASIC3.66□□□□□ -1.82
CASP4P49662 RNU6-796P-201ENST00000391086 107 ntBASIC3.66□□□□□ -1.82
CASP4P49662 VN1R42P-201ENST00000424651 344 ntBASIC3.66□□□□□ -1.82
CASP4P49662 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.66□□□□□ -1.82
CASP4P49662 AL159987.2-201ENST00000432754 307 ntBASIC3.66□□□□□ -1.82
CASP4P49662 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.66□□□□□ -1.82
CASP4P49662 RNFT1P2-201ENST00000443064 757 ntBASIC3.66□□□□□ -1.82
CASP4P49662 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms