Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GABPAP-201ENST00000419271 1356 ntBASIC3.63□□□□□ -1.83
HMGCLP35914 AC073055.1-201ENST00000456901 1621 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCLP35914 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCLP35914 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCLP35914 AL049737.1-201ENST00000413920 1403 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCLP35914 AF127577.6-201ENST00000623352 2191 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 AC119744.1-201ENST00000454746 1715 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HMGCLP35914 RNU6-353P-201ENST00000364266 108 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCLP35914 SNORD3H-201ENST00000384486 214 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 MIR554-201ENST00000384874 96 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 AL035423.1-201ENST00000420331 213 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 SDCBPP2-201ENST00000424643 885 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCLP35914 AC006989.1-201ENST00000427212 131 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCLP35914 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCLP35914 AL031663.1-201ENST00000437445 219 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 AC002542.1-201ENST00000440683 193 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCLP35914 RNU7-140P-201ENST00000459546 60 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 TRBV8-2-201ENST00000475637 270 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCLP35914 SUMO2P5-201ENST00000506790 245 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCLP35914 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.62□□□□□ -1.83
HMGCLP35914 RNU1-95P-201ENST00000516357 160 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 RNU1-128P-201ENST00000516704 160 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCLP35914 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCLP35914 AC006518.2-201ENST00000542513 940 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCLP35914 MIR5047-201ENST00000579212 100 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCLP35914 AC090330.1-201ENST00000588646 764 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 AC020914.6-201ENST00000594327 272 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 AC096947.1-201ENST00000603233 470 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
HMGCLP35914 AC024060.1-201ENST00000607052 494 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGCLP35914 CYCSP41-201ENST00000616920 296 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCLP35914 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGCLP35914 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCLP35914 AP001148.1-201ENST00000624124 2359 ntBASIC3.62□□□□□ -1.83
HMGCLP35914 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HMGCLP35914 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCLP35914 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCLP35914 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
HMGCLP35914 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGCLP35914 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCLP35914 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
HMGCLP35914 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCLP35914 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCLP35914 AL512646.1-201ENST00000269395 1077 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCLP35914 MIR134-201ENST00000385258 73 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 SNORA11C-201ENST00000408532 129 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 RAB9AP3-201ENST00000412737 573 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 AC106883.1-201ENST00000418805 562 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCLP35914 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCLP35914 AC018644.1-201ENST00000429934 551 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGCLP35914 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCLP35914 AL929288.2-201ENST00000446368 407 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 AL133547.1-201ENST00000448546 220 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 RAB9AP1-201ENST00000449393 573 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCLP35914 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCLP35914 SNORD105B-201ENST00000458770 79 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 snoU109.3-201ENST00000459477 145 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 RN7SL542P-201ENST00000467147 294 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 HMGB1P21-201ENST00000502313 581 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 PRELID3BP6-201ENST00000503839 571 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCLP35914 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCLP35914 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGCLP35914 COX6B1P6-201ENST00000522347 255 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 AC010306.1-201ENST00000523223 1117 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 AC090751.1-201ENST00000566966 267 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.61□□□□□ -1.83
HMGCLP35914 MIR4666A-201ENST00000580160 79 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCLP35914 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGCLP35914 AL391001.1-201ENST00000602747 715 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 AL109618.2-201ENST00000605527 211 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 AL355816.1-201ENST00000607951 118 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HMGCLP35914 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HMGCLP35914 AC069209.1-201ENST00000619282 651 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 AC104985.3-201ENST00000623479 597 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HMGCLP35914 BX649567.1-201ENST00000642071 1134 ntBASIC3.61□□□□□ -1.83
HMGCLP35914 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGCLP35914 CR381670.1-201ENST00000624291 1693 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms