Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AGGF1P8-201ENST00000562979 1000 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 MIR5684-201ENST00000585074 65 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.25□□□□□ -1.73
HOXC13P31276 BNIP3P31-201ENST00000604515 566 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 AC002487.1-201ENST00000604565 994 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 AC091953.5-201ENST00000622919 233 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXC13P31276 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXC13P31276 AC139713.2-210ENST00000641741 992 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXC13P31276 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC13P31276 AC016588.2-201ENST00000632484 3021 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC13P31276 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC13P31276 MTND5P31-201ENST00000419366 1374 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXC13P31276 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXC13P31276 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC13P31276 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC13P31276 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC13P31276 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HOXC13P31276 OR1L1-202ENST00000373686 1083 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC13P31276 RNU6-328P-201ENST00000390887 106 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 PTMAP5-201ENST00000393073 333 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXC13P31276 GSTA8P-201ENST00000404253 637 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 RNU6ATAC-201ENST00000408749 126 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXC13P31276 TPT1P2-201ENST00000413105 503 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 LIPT1P1-201ENST00000415870 1186 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC13P31276 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC13P31276 NANOGP6-201ENST00000429190 847 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 VDAC1P3-201ENST00000434069 851 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 ELOCP18-201ENST00000434209 337 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC13P31276 AC069285.2-201ENST00000440210 275 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC13P31276 AL133547.1-201ENST00000448546 220 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC13P31276 AL445669.2-201ENST00000454425 421 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC13P31276 RPL7P1-201ENST00000468161 747 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 RPL7P9-201ENST00000468715 747 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 RPL7P49-201ENST00000471402 708 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 RPS3AP6-201ENST00000484430 795 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 MTCO3P35-201ENST00000485582 781 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 AC026414.1-201ENST00000504046 698 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 AC091860.1-201ENST00000505723 432 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC13P31276 AC017037.1-201ENST00000508460 471 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 RNU7-143P-201ENST00000516781 65 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 AP001207.1-201ENST00000524051 481 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 AP004371.1-201ENST00000525240 214 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 OR4A45P-201ENST00000529954 901 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXC13P31276 AC092470.1-201ENST00000546187 132 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC13P31276 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXC13P31276 AC113368.1-201ENST00000603736 382 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 AC112220.2-201ENST00000605513 533 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 AC099785.1-201ENST00000605697 437 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 AP002802.2-201ENST00000605877 235 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 AL513477.2-201ENST00000607858 568 ntBASIC4.24□□□□□ -1.73
HOXC13P31276 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXC13P31276 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HOXC13P31276 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC13P31276 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HOXC13P31276 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC13P31276 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
HOXC13P31276 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXC13P31276 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXC13P31276 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXC13P31276 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXC13P31276 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXC13P31276 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXC13P31276 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXC13P31276 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXC13P31276 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXC13P31276 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HOXC13P31276 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXC13P31276 RPL7P27-201ENST00000403775 720 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 OFD1P18Y-201ENST00000420889 959 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 AC233981.1-201ENST00000423224 461 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 PTP4A1P7-201ENST00000423476 514 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 RPL21P66-201ENST00000426566 466 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXC13P31276 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXC13P31276 AL035246.1-201ENST00000433554 1255 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 SETP8-201ENST00000435341 628 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 RPL7P28-201ENST00000437739 740 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 RPL7P47-201ENST00000497299 556 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.23□□□□□ -1.73
HOXC13P31276 Y_RNA.717-201ENST00000517106 92 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXC13P31276 AP001636.2-201ENST00000525517 696 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 AP003102.1-201ENST00000525638 661 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms