Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 SNORA9.2-201ENST00000365361 133 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.93□□□□□ -1.94
COL5A1P20908 RNU6-851P-201ENST00000384565 107 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.93□□□□□ -1.94
COL5A1P20908 AC069540.1-201ENST00000446320 988 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 AC010468.1-201ENST00000461022 817 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 RPS20P22-201ENST00000473700 357 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.93□□□□□ -1.94
COL5A1P20908 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC2.93□□□□□ -1.94
COL5A1P20908 AC024153.1-201ENST00000603103 365 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 AC022960.2-201ENST00000616300 666 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL5A1P20908 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
COL5A1P20908 AC090971.4-201ENST00000560291 1800 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COL5A1P20908 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
COL5A1P20908 AC107027.3-201ENST00000565095 3473 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 RPL7P26-201ENST00000333817 754 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.93□□□□□ -1.94
COL5A1P20908 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC2.93□□□□□ -1.94
COL5A1P20908 MRPS33P4-201ENST00000434892 317 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 RSL24D1P2-201ENST00000445584 366 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.93□□□□□ -1.94
COL5A1P20908 PRDX3P4-201ENST00000470828 747 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.93□□□□□ -1.94
COL5A1P20908 AC083906.5-201ENST00000503722 328 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 AC114967.1-201ENST00000504890 259 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.93□□□□□ -1.94
COL5A1P20908 HIGD1AP13-201ENST00000509878 289 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 PDCL2P2-201ENST00000533651 189 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.93□□□□□ -1.94
COL5A1P20908 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.93□□□□□ -1.94
COL5A1P20908 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 AC012467.1-201ENST00000607740 256 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 AP005212.4-201ENST00000614206 710 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 AL118556.2-201ENST00000614375 824 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.93□□□□□ -1.94
COL5A1P20908 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL5A1P20908 GABRG2-229ENST00000641017 3628 ntBASIC2.93□□□□□ -1.94
COL5A1P20908 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.93□□□□□ -1.94
COL5A1P20908 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL5A1P20908 AL451142.2-201ENST00000429076 2090 ntBASIC2.92□□□□□ -1.94
COL5A1P20908 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.92□□□□□ -1.94
COL5A1P20908 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL5A1P20908 NR1H5P-201ENST00000452683 1377 ntBASIC2.92□□□□□ -1.94
COL5A1P20908 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.92□□□□□ -1.94
COL5A1P20908 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.92□□□□□ -1.94
COL5A1P20908 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL5A1P20908 SNORD56.3-201ENST00000363507 71 ntBASIC2.92□□□□□ -1.94
COL5A1P20908 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL5A1P20908 SNORA70B-201ENST00000384210 135 ntBASIC2.92□□□□□ -1.94
COL5A1P20908 RN7SKP285-201ENST00000410137 318 ntBASIC2.92□□□□□ -1.94
COL5A1P20908 AL645937.1-202ENST00000421799 937 ntBASIC2.92□□□□□ -1.94
COL5A1P20908 GTF2IP23-201ENST00000423746 351 ntBASIC2.92□□□□□ -1.94
COL5A1P20908 HMGB3P11-201ENST00000440127 604 ntBASIC2.92□□□□□ -1.94
COL5A1P20908 RPS20P32-201ENST00000456044 356 ntBASIC2.92□□□□□ -1.94
COL5A1P20908 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.92□□□□□ -1.94
COL5A1P20908 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL5A1P20908 uc_338.1-201ENST00000612113 180 ntBASIC2.92□□□□□ -1.94
COL5A1P20908 AC009313.2-201ENST00000417893 1941 ntBASIC2.92□□□□□ -1.94
COL5A1P20908 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC2.92□□□□□ -1.94
COL5A1P20908 AC108206.1-201ENST00000570186 4159 ntBASIC2.92□□□□□ -1.94
COL5A1P20908 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL5A1P20908 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL5A1P20908 AC083799.1-201ENST00000366451 910 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 MTND3P20-201ENST00000407663 186 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 AC073508.1-201ENST00000428866 656 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 ARL5AP4-201ENST00000430731 512 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.91□□□□□ -1.94
COL5A1P20908 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.91□□□□□ -1.94
COL5A1P20908 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL5A1P20908 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.91□□□□□ -1.94
COL5A1P20908 AC017037.2-201ENST00000513850 890 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 AC104027.1-201ENST00000521887 300 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.91□□□□□ -1.94
COL5A1P20908 AC007336.1-201ENST00000576365 3828 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.91□□□□□ -1.94
COL5A1P20908 AC016911.1-201ENST00000613297 452 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
COL5A1P20908 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL5A1P20908 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL5A1P20908 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.91□□□□□ -1.94
COL5A1P20908 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC2.91□□□□□ -1.94
COL5A1P20908 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL5A1P20908 MIR3074-201ENST00000384885 81 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 SKINT1L-201ENST00000401057 817 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 AC244453.4-201ENST00000419150 388 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 MYL8P-204ENST00000431574 518 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL5A1P20908 UBE2V2P1-201ENST00000434717 398 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 EXTL2P1-201ENST00000446218 416 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.91□□□□□ -1.94
COL5A1P20908 HMGN2P7-201ENST00000456186 273 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 AC128713.1-201ENST00000471495 306 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 OR52A4P-203ENST00000498233 1014 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 MTND2P31-201ENST00000512602 616 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 AC018797.3-201ENST00000513388 1241 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 ACTR6P1-201ENST00000514311 1104 ntBASIC2.91□□□□□ -1.94
COL5A1P20908 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms