Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.42□□□□□ -1.86
HOXC4P09017 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC4P09017 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC4P09017 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
HOXC4P09017 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC4P09017 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC4P09017 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC4P09017 AC245884.10-201ENST00000597355 337 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 AL031985.2-201ENST00000600955 480 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 AC008147.4-201ENST00000617570 1204 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 AC010872.1-201ENST00000624225 675 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 AC068647.1-201ENST00000489539 2265 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HOXC4P09017 AL049737.1-201ENST00000413920 1403 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC4P09017 AC073346.2-201ENST00000624724 2058 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC4P09017 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC4P09017 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC4P09017 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
HOXC4P09017 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC4P09017 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC4P09017 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC4P09017 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC4P09017 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC4P09017 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC4P09017 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
HOXC4P09017 MIR124-3-201ENST00000384866 87 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HOXC4P09017 AL391417.1-201ENST00000404100 426 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC4P09017 AL049610.1-201ENST00000423374 372 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 MTND4P24-201ENST00000424002 397 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 MTCO2P1-201ENST00000424648 477 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC4P09017 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC4P09017 AC105402.2-201ENST00000438503 358 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC4P09017 RPL26P28-201ENST00000451325 435 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXC4P09017 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC4P09017 RN7SL807P-201ENST00000470923 297 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 AC078785.3-201ENST00000476607 425 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC4P09017 FCF1P8-201ENST00000510322 597 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXC4P09017 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC4P09017 AC113192.3-201ENST00000529152 742 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC4P09017 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HOXC4P09017 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC4P09017 AC011611.1-201ENST00000552179 197 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXC4P09017 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC4P09017 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC4P09017 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXC4P09017 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC4P09017 AC006254.3-201ENST00000603353 884 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 AP003117.2-201ENST00000606010 545 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 AL159169.3-201ENST00000608871 561 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 AC018645.2-201ENST00000609151 472 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 AC096577.2-201ENST00000611455 153 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 AC016597.2-201ENST00000613256 341 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 AC022960.3-201ENST00000619794 441 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC4P09017 U6.98-201ENST00000637157 84 ntBASIC3.41□□□□□ -1.86
HOXC4P09017 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC4P09017 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC4P09017 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC4P09017 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC4P09017 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HOXC4P09017 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HOXC4P09017 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HOXC4P09017 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HOXC4P09017 SNORD51.1-201ENST00000365405 77 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AL035405.1-201ENST00000400795 710 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 HNRNPDP2-201ENST00000406475 478 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXC4P09017 RPL31P45-201ENST00000419532 356 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 MORF4L1P7-201ENST00000426038 703 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 USP9YP31-201ENST00000431405 881 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC4P09017 AL353093.1-201ENST00000441292 436 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC4P09017 TPTE2P6-202ENST00000445572 1007 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 RPS29P31-201ENST00000446147 164 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC4P09017 RPL21P10-201ENST00000463521 490 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AC073522.1-201ENST00000483312 377 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 RPL21P13-201ENST00000488305 481 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AP001086.1-201ENST00000494882 321 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AC012170.1-201ENST00000495139 359 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC4P09017 HSPD1P15-201ENST00000505573 1122 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 MTCO1P31-201ENST00000506355 492 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AC010468.3-201ENST00000508225 458 ntBASIC3.4□□□□□ -1.87
HOXC4P09017 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC4P09017 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXC4P09017 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC4P09017 AC104072.1-201ENST00000568817 668 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms