Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.59□□□□□ -1.83
MT-ND1P03886 MTATP6P24-201ENST00000576835 677 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 MIR4284-201ENST00000578924 81 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 BPTFP1-201ENST00000579209 492 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.59□□□□□ -1.83
MT-ND1P03886 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MT-ND1P03886 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.59□□□□□ -1.83
MT-ND1P03886 AC244505.7-201ENST00000599675 272 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 AL445435.1-201ENST00000604232 665 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 AC091167.4-201ENST00000605079 184 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 ARF4P1-201ENST00000605447 541 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 AC013244.3-201ENST00000605614 388 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 AL583856.2-201ENST00000606298 543 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 AP004247.3-201ENST00000608682 624 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
MT-ND1P03886 MIR6820-201ENST00000611508 62 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 VN1R74P-201ENST00000613259 503 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.59□□□□□ -1.83
MT-ND1P03886 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.59□□□□□ -1.83
MT-ND1P03886 AC006386.1-201ENST00000619436 415 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 AC068787.1-201ENST00000623908 691 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 AP001002.2-201ENST00000625137 386 ntBASIC3.59□□□□□ -1.83
MT-ND1P03886 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
MT-ND1P03886 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MT-ND1P03886 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
MT-ND1P03886 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
MT-ND1P03886 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.59□□□□□ -1.84
MT-ND1P03886 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
MT-ND1P03886 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
MT-ND1P03886 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.58□□□□□ -1.84
MT-ND1P03886 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.58□□□□□ -1.84
MT-ND1P03886 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
MT-ND1P03886 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MT-ND1P03886 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MT-ND1P03886 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.58□□□□□ -1.84
MT-ND1P03886 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.58□□□□□ -1.84
MT-ND1P03886 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.58□□□□□ -1.84
MT-ND1P03886 RPS3AP25-201ENST00000411660 793 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.58□□□□□ -1.84
MT-ND1P03886 AC096632.1-201ENST00000427395 310 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.58□□□□□ -1.84
MT-ND1P03886 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.58□□□□□ -1.84
MT-ND1P03886 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.58□□□□□ -1.84
MT-ND1P03886 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.58□□□□□ -1.84
MT-ND1P03886 RPL21P112-201ENST00000434403 463 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 AC073143.1-201ENST00000436316 395 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.58□□□□□ -1.84
MT-ND1P03886 RPS29P31-201ENST00000446147 164 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 EXTL2P1-201ENST00000446218 416 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 NUTF2P3-201ENST00000448540 384 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.58□□□□□ -1.84
MT-ND1P03886 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.58□□□□□ -1.84
MT-ND1P03886 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.58□□□□□ -1.84
MT-ND1P03886 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.58□□□□□ -1.84
MT-ND1P03886 DEFB130C-202ENST00000530001 230 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MT-ND1P03886 LRRC6P1-201ENST00000532188 885 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.58□□□□□ -1.84
MT-ND1P03886 AGGF1P8-201ENST00000562979 1000 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.58□□□□□ -1.84
MT-ND1P03886 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.58□□□□□ -1.84
MT-ND1P03886 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.58□□□□□ -1.84
MT-ND1P03886 MIR4443-201ENST00000585052 53 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.58□□□□□ -1.84
MT-ND1P03886 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.58□□□□□ -1.84
MT-ND1P03886 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.58□□□□□ -1.84
MT-ND1P03886 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.58□□□□□ -1.84
MT-ND1P03886 AC010975.3-201ENST00000618727 978 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 AL158163.2-201ENST00000619110 700 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.58□□□□□ -1.84
MT-ND1P03886 MIR4278-201ENST00000636094 69 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 AP002001.2-201ENST00000529025 1469 ntBASIC3.58□□□□□ -1.84
MT-ND1P03886 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.58□□□□□ -1.84
MT-ND1P03886 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.58□□□□□ -1.84
MT-ND1P03886 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MT-ND1P03886 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MT-ND1P03886 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MT-ND1P03886 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
MT-ND1P03886 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
MT-ND1P03886 RNU4-51P-201ENST00000364206 140 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 SNORA7.2-201ENST00000364446 145 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 SNORD116-12-201ENST00000384468 92 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 RNU6-906P-201ENST00000384700 70 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 MIR607-201ENST00000385241 96 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 SFR1P1-201ENST00000403720 688 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 MIR1183-201ENST00000408856 89 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.57□□□□□ -1.84
MT-ND1P03886 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MT-ND1P03886 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MT-ND1P03886 GABPAP-201ENST00000419271 1356 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 RAC1P8-201ENST00000427086 527 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 NANOGP2-201ENST00000435391 727 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 AL356276.2-201ENST00000435919 558 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.57□□□□□ -1.84
MT-ND1P03886 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.57□□□□□ -1.84
MT-ND1P03886 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.57□□□□□ -1.84
MT-ND1P03886 AL359893.1-201ENST00000447628 1580 ntBASIC3.57□□□□□ -1.84
MT-ND1P03886 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.57□□□□□ -1.84
MT-ND1P03886 ZNF37BP-203ENST00000452306 1352 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms