Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 RNU6-356P-201ENST00000384140 107 ntBASIC3.2□□□□□ -1.9
CTNSO60931 SNORA70E-201ENST00000384492 135 ntBASIC3.2□□□□□ -1.9
CTNSO60931 MIR183-201ENST00000384958 110 ntBASIC3.2□□□□□ -1.9
CTNSO60931 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CTNSO60931 TAF9BP2-201ENST00000400856 499 ntBASIC3.2□□□□□ -1.9
CTNSO60931 XKRYP4-201ENST00000414395 483 ntBASIC3.2□□□□□ -1.9
CTNSO60931 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNSO60931 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTNSO60931 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNSO60931 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNSO60931 RPL6P5-201ENST00000445678 828 ntBASIC3.2□□□□□ -1.9
CTNSO60931 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNSO60931 XKRYP5-201ENST00000449659 483 ntBASIC3.2□□□□□ -1.9
CTNSO60931 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNSO60931 AC097262.1-201ENST00000452559 548 ntBASIC3.2□□□□□ -1.9
CTNSO60931 AC010468.1-201ENST00000461022 817 ntBASIC3.2□□□□□ -1.9
CTNSO60931 AP002884.2-201ENST00000471647 395 ntBASIC3.2□□□□□ -1.9
CTNSO60931 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNSO60931 AC020893.1-201ENST00000502452 580 ntBASIC3.2□□□□□ -1.9
CTNSO60931 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.2□□□□□ -1.9
CTNSO60931 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNSO60931 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNSO60931 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.2□□□□□ -1.9
CTNSO60931 RN7SKP283-201ENST00000517197 270 ntBASIC3.2□□□□□ -1.9
CTNSO60931 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNSO60931 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNSO60931 OR4T1P-201ENST00000554933 911 ntBASIC3.2□□□□□ -1.9
CTNSO60931 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNSO60931 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNSO60931 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNSO60931 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNSO60931 NTAN1P1-201ENST00000603150 646 ntBASIC3.2□□□□□ -1.9
CTNSO60931 AC025016.1-201ENST00000616746 682 ntBASIC3.2□□□□□ -1.9
CTNSO60931 AL079305.1-201ENST00000623159 3008 ntBASIC3.2□□□□□ -1.9
CTNSO60931 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.2□□□□□ -1.9
CTNSO60931 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.2□□□□□ -1.9
CTNSO60931 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CTNSO60931 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTNSO60931 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CTNSO60931 MTCO1P12-201ENST00000414273 1543 ntBASIC3.19□□□□□ -1.9
CTNSO60931 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
CTNSO60931 AC017071.1-201ENST00000564407 2204 ntBASIC3.19□□□□□ -1.9
CTNSO60931 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNSO60931 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNSO60931 AC007496.3-201ENST00000624987 3443 ntBASIC3.19□□□□□ -1.9
CTNSO60931 OR52E6-202ENST00000379946 954 ntBASIC3.19□□□□□ -1.9
CTNSO60931 MIR490-201ENST00000384865 128 ntBASIC3.19□□□□□ -1.9
CTNSO60931 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CTNSO60931 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNSO60931 DNAJC19P6-201ENST00000401853 280 ntBASIC3.19□□□□□ -1.9
CTNSO60931 RNU6-55P-201ENST00000411092 107 ntBASIC3.19□□□□□ -1.9
CTNSO60931 RNU6-954P-201ENST00000411355 107 ntBASIC3.19□□□□□ -1.9
CTNSO60931 RPL31P2-201ENST00000413849 377 ntBASIC3.19□□□□□ -1.9
CTNSO60931 LIPT1P1-201ENST00000415870 1186 ntBASIC3.19□□□□□ -1.9
CTNSO60931 NUP35P2-201ENST00000416748 943 ntBASIC3.19□□□□□ -1.9
CTNSO60931 RPS15AP6-201ENST00000420703 385 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AL389915.1-201ENST00000422463 466 ntBASIC3.19□□□□□ -1.9
CTNSO60931 MTND4P24-201ENST00000424002 397 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNSO60931 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNSO60931 MTCO1P43-201ENST00000431831 488 ntBASIC3.19□□□□□ -1.9
CTNSO60931 TRIM60P13-201ENST00000432350 1283 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AL159987.2-201ENST00000432754 307 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNSO60931 AC008264.1-201ENST00000447612 367 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNSO60931 MTND3P4-201ENST00000453537 303 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AC006539.3-201ENST00000454258 129 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AC092754.2-201ENST00000463506 460 ntBASIC3.19□□□□□ -1.9
CTNSO60931 CYCSP20-201ENST00000473154 315 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AC093663.2-201ENST00000484625 313 ntBASIC3.19□□□□□ -1.9
CTNSO60931 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNSO60931 AC112198.1-201ENST00000505369 1220 ntBASIC3.19□□□□□ -1.9
CTNSO60931 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTNSO60931 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNSO60931 SNORA48.9-201ENST00000516419 162 ntBASIC3.19□□□□□ -1.9
CTNSO60931 NDUFB9P3-201ENST00000521269 501 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNSO60931 AP000619.3-201ENST00000535634 1127 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNSO60931 AC011602.1-201ENST00000546484 331 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AC074029.1-201ENST00000552531 1044 ntBASIC3.19□□□□□ -1.9
CTNSO60931 CENPUP2-201ENST00000555897 1186 ntBASIC3.19□□□□□ -1.9
CTNSO60931 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNSO60931 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNSO60931 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNSO60931 AL365400.2-201ENST00000605604 902 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AC112503.1-201ENST00000608436 391 ntBASIC3.19□□□□□ -1.9
CTNSO60931 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNSO60931 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNSO60931 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNSO60931 AC092184.1-201ENST00000625042 715 ntBASIC3.19□□□□□ -1.9
CTNSO60931 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CTNSO60931 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNSO60931 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNSO60931 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CTNSO60931 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CTNSO60931 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTNSO60931 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNSO60931 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms