Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MIR627-201ENST00000384979 97 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 TANK-203ENST00000402568 878 ntTSL 5 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC080125.1-201ENST00000414888 684 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 RPA2P2-201ENST00000419698 796 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC245054.1-201ENST00000420944 258 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AL606495.1-201ENST00000422100 813 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 MORF4L1P7-201ENST00000426038 703 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 RPS24P8-201ENST00000431490 402 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 RPS15AP7-201ENST00000439294 405 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 RPL31P20-201ENST00000449593 360 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 TPT1P13-201ENST00000449760 499 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 HMGB1P15-201ENST00000453854 435 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AL035407.2-201ENST00000454090 378 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 RN7SL303P-201ENST00000469773 251 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 RPS23P3-201ENST00000470993 430 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 UQCRHP4-201ENST00000471686 272 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 RPL37P23-201ENST00000492641 294 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 RNA5SP82-201ENST00000516707 92 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 IGLV2-28-201ENST00000520681 304 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 OR5G4P-201ENST00000525251 760 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 MTND2P26-201ENST00000528255 1029 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC020978.7-201ENST00000575953 1187 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC245389.1-201ENST00000605141 529 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 MIR6895-201ENST00000613497 78 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 U4.6-201ENST00000621618 127 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC007204.1-201ENST00000621794 555 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 AC006963.1-201ENST00000624003 1052 ntBASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CHKB-CPT1BH3BT56 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 MIR129-1-201ENST00000384972 72 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AL391361.1-201ENST00000405580 489 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC096533.1-201ENST00000411645 353 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC007064.1-201ENST00000412238 351 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 RPS15AP40-201ENST00000419621 391 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AL592293.2-201ENST00000422292 996 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC005517.2-201ENST00000424673 553 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 OR51AB1P-201ENST00000429046 620 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 MTCYBP29-201ENST00000436327 1006 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 CDC27P1-201ENST00000445384 715 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC006326.1-201ENST00000445465 787 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC023424.2-201ENST00000493479 777 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC005351.1-201ENST00000511152 786 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC105914.1-201ENST00000511798 226 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 ATP5LP3-201ENST00000514223 304 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC087808.1-201ENST00000520501 361 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC007225.2-201ENST00000562529 256 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 MIR3605-201ENST00000583214 100 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC060766.3-201ENST00000591442 263 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC012493.2-201ENST00000595083 291 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AL645944.1-201ENST00000603857 493 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC005191.1-201ENST00000603950 358 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 SUMO2P15-201ENST00000604285 278 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 MIR7851-201ENST00000610611 160 ntBASIC1.66□□□□□ -2.14
CHKB-CPT1BH3BT56 AC011890.2-201ENST00000613393 294 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms