Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC010198.2-201ENST00000550612 259 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 OR4T1P-201ENST00000554933 911 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC044860.2-201ENST00000561005 179 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 MIR3690-201ENST00000580266 75 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 MIR4480-201ENST00000582492 71 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RPAP2P1-201ENST00000603626 1168 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC025588.3-201ENST00000604182 274 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC005156.1-201ENST00000613371 573 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC090116.1-201ENST00000615679 446 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 VN1R7P-201ENST00000619242 903 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 MIR6886-201ENST00000619864 61 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC091953.3-201ENST00000623220 236 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC112200.1-201ENST00000625015 234 ntBASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.14□□□□□ -1.91
KCNIP3Q9Y2W7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC130650.2-201ENST00000618736 2403 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC116096.1-201ENST00000566804 2314 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-600P-201ENST00000362524 99 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-263P-201ENST00000363811 107 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 SNORA51.2-201ENST00000364595 132 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 RNU6-629P-201ENST00000384061 103 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 SNORD116-23-201ENST00000384645 92 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 RPS26P8-201ENST00000393490 348 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 SNORA11.5-201ENST00000408163 128 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 TPT1P2-201ENST00000413105 503 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC006548.1-201ENST00000427470 102 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AL158071.1-201ENST00000430315 461 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 KCTD10P1-201ENST00000434203 625 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 MRPS18BP2-201ENST00000434310 759 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 ELOCP13-201ENST00000443934 329 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 SLC31A1P1-201ENST00000451221 567 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 RPS4XP22-201ENST00000480755 780 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 RPL23AP55-201ENST00000498163 452 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC026414.1-201ENST00000504046 698 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC108475.1-201ENST00000507880 950 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 ARL2BPP5-201ENST00000523141 481 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 TGIF1P1-201ENST00000558095 802 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 ZNF971P-201ENST00000562068 1249 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 SNORD39.3-201ENST00000584451 71 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC006116.5-201ENST00000591936 559 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 VN1R74P-201ENST00000613259 503 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 MIR8059-201ENST00000620427 81 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AP000943.4-201ENST00000622912 357 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 CR381572.1-201ENST00000625098 102 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 DBF4P1-201ENST00000412976 1892 ntBASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
KCNIP3Q9Y2W7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms