Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL023807.1-201ENST00000407932 359 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 RN7SKP146-201ENST00000410242 334 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 RNA5SP345-201ENST00000410646 108 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 RNU6-193P-201ENST00000410977 107 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 AL354890.1-201ENST00000413730 346 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 BX284632.2-201ENST00000421091 399 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 AL358176.2-201ENST00000425769 204 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 AL356276.2-201ENST00000435919 558 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 AL359955.2-201ENST00000445380 353 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 AL590639.1-201ENST00000456484 337 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 RNU6-333P-201ENST00000459117 107 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 HMGB3P15-201ENST00000507326 574 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 TXNP6-201ENST00000510190 310 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 AC105417.1-201ENST00000514691 285 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 RNU6-559P-201ENST00000516151 98 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 IGLV3-30-201ENST00000524362 298 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 AC103843.2-201ENST00000530523 682 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 AP000907.2-201ENST00000530827 353 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 PCNAP4-201ENST00000532690 730 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 GLUD1P4-201ENST00000590914 418 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 AC016925.2-201ENST00000605108 242 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 7SK.10-201ENST00000621414 298 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSU72Q9NP77 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSU72Q9NP77 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSU72Q9NP77 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSU72Q9NP77 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSU72Q9NP77 Y_RNA.22-201ENST00000362492 102 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 RN7SKP44-201ENST00000363602 316 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 RNU6-522P-201ENST00000364497 107 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 Y_RNA.339-201ENST00000365325 102 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 RNU4-48P-201ENST00000365559 182 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 SNORA22B-201ENST00000383876 138 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 RNU6-39P-201ENST00000384344 107 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 AL359634.1-202ENST00000404721 284 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 MTCO2P27-201ENST00000420740 428 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 RPS20P5-201ENST00000434808 360 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 NANOGP10-201ENST00000453325 895 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 RNU7-152P-201ENST00000458982 64 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 RN7SL583P-201ENST00000475692 287 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 RNU4-29P-201ENST00000515943 174 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 AP005435.4-201ENST00000529514 284 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 AL163153.1-201ENST00000554223 283 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 OR1E3-201ENST00000575608 948 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 AC006270.2-201ENST00000578523 652 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 AC080078.3-201ENST00000605407 463 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.49□□□□□ -1.53
SSU72Q9NP77 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSU72Q9NP77 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSU72Q9NP77 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSU72Q9NP77 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSU72Q9NP77 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.49□□□□□ -1.53
SSU72Q9NP77 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSU72Q9NP77 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSU72Q9NP77 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSU72Q9NP77 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms