Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 MTND2P41-201ENST00000637599 773 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 FP325313.1-201ENST00000638228 703 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 RAD17P1-201ENST00000418130 2042 ntBASIC4.19□□□□□ -1.74
BRF2Q9HAW0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.19□□□□□ -1.74
BRF2Q9HAW0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 RN7SKP103-201ENST00000363848 320 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 RNU6-931P-201ENST00000363850 107 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 ATP5F1P4-201ENST00000397288 746 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AL590084.2-201ENST00000401481 382 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 RNA5SP239-201ENST00000410218 129 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AIMP1P1-201ENST00000418670 937 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC098592.1-201ENST00000419352 333 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 FNDC3CP-201ENST00000420795 1155 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC006548.1-201ENST00000427470 102 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 RPL35AP28-201ENST00000459730 331 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC097493.1-201ENST00000463958 372 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 RN7SL354P-201ENST00000469282 294 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AP000926.1-201ENST00000479573 241 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC104685.1-201ENST00000502445 371 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC010625.1-201ENST00000511296 403 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 RNA5SP216-201ENST00000516111 123 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC104986.1-201ENST00000517978 436 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AP006289.1-201ENST00000538089 277 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC051619.2-201ENST00000559063 397 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC002400.1-201ENST00000569310 726 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 RN7SL176P-201ENST00000580352 264 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 MAGOH2P-202ENST00000584384 429 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC005255.1-201ENST00000593748 216 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC124312.4-201ENST00000605533 310 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC012409.3-201ENST00000611343 981 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AL450489.1-201ENST00000612071 468 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AL021997.2-201ENST00000615674 271 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC078883.4-201ENST00000623218 367 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 CR381572.1-201ENST00000625098 102 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 AL356473.1-201ENST00000406203 1408 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BRF2Q9HAW0 ZNF542P-204ENST00000482727 1305 ntBASIC4.18□□□□□ -1.74
BRF2Q9HAW0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 AC087190.4-201ENST00000574616 8334 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 OR5P1P-201ENST00000299512 925 ntBASIC4.17□□□□□ -1.74
BRF2Q9HAW0 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.17□□□□□ -1.74
BRF2Q9HAW0 ATP5F1P3-201ENST00000397213 657 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms