Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.59□□□□□ -1.35
HLA-CQ95604 AC133473.1-201ENST00000455173 299 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.59□□□□□ -1.35
HLA-CQ95604 MTND1P19-201ENST00000511780 315 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 AC097486.1-201ENST00000515331 210 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 RNU6-138P-201ENST00000515952 107 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.59□□□□□ -1.35
HLA-CQ95604 HMGN1P28-201ENST00000521340 364 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.59□□□□□ -1.35
HLA-CQ95604 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC6.59□□□□□ -1.35
HLA-CQ95604 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC6.59□□□□□ -1.35
HLA-CQ95604 HMGB2P1-201ENST00000591146 634 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 FO393422.1-201ENST00000603908 708 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 MTND4LP5-201ENST00000605152 292 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 AC023813.4-201ENST00000607580 580 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 AL136228.1-201ENST00000622221 319 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 AC130448.2-201ENST00000624082 374 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-CQ95604 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-CQ95604 C4BPAP1-201ENST00000415474 1893 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-CQ95604 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.59□□□□□ -1.35
HLA-CQ95604 AC079753.1-201ENST00000623243 3868 ntBASIC6.59□□□□□ -1.35
HLA-CQ95604 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HLA-CQ95604 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-CQ95604 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.59□□□□□ -1.36
HLA-CQ95604 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HLA-CQ95604 AC010329.2-201ENST00000595195 2737 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
HLA-CQ95604 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-CQ95604 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.58□□□□□ -1.36
HLA-CQ95604 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-CQ95604 AC015799.1-201ENST00000622996 3122 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HLA-CQ95604 AC241584.2-201ENST00000637142 2090 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-CQ95604 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.58□□□□□ -1.36
HLA-CQ95604 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-CQ95604 MIR375-201ENST00000362103 64 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HLA-CQ95604 AC097374.1-203ENST00000400783 485 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 AL109755.1-201ENST00000401791 649 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 RNU2-38P-201ENST00000410856 79 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-CQ95604 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.58□□□□□ -1.36
HLA-CQ95604 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-CQ95604 RNU6-323P-201ENST00000521915 107 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-CQ95604 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-CQ95604 AL133271.1-201ENST00000538229 291 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-CQ95604 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.58□□□□□ -1.36
HLA-CQ95604 HMGB3P26-201ENST00000560051 582 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.58□□□□□ -1.36
HLA-CQ95604 AC005191.1-201ENST00000603950 358 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.58□□□□□ -1.36
HLA-CQ95604 MIR7155-201ENST00000615925 56 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 MIR4272-201ENST00000635924 64 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-CQ95604 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-CQ95604 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
HLA-CQ95604 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-CQ95604 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-CQ95604 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-CQ95604 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-CQ95604 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-CQ95604 MAPK10-383ENST00000642032 3390 ntBASIC6.58□□□□□ -1.36
HLA-CQ95604 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-CQ95604 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-CQ95604 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HLA-CQ95604 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-CQ95604 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-CQ95604 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-CQ95604 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-CQ95604 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-CQ95604 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HLA-CQ95604 AL122126.1-201ENST00000546905 1318 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-CQ95604 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-CQ95604 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HLA-CQ95604 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
HLA-CQ95604 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.57□□□□□ -1.36
HLA-CQ95604 RNU6-1243P-201ENST00000364028 107 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 RNU6-1293P-201ENST00000384077 107 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 RNU6-432P-201ENST00000384196 109 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 Y_RNA.551-201ENST00000384661 102 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 RNU6-1093P-201ENST00000391194 107 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 AP000580.1-201ENST00000404439 358 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.57□□□□□ -1.36
HLA-CQ95604 AC096664.2-201ENST00000411843 406 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 AL137014.1-201ENST00000420490 1226 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.57□□□□□ -1.36
HLA-CQ95604 PIGPP3-201ENST00000425307 415 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 AC245884.2-201ENST00000426257 404 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 CYP4F32P-201ENST00000426492 504 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 AL031736.2-201ENST00000426573 787 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6.57□□□□□ -1.36
HLA-CQ95604 RPL12P17-201ENST00000432393 498 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 AC092162.1-201ENST00000432828 434 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms