Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AL445665.1-202ENST00000452436 324 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 RPS23P2-201ENST00000463671 415 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC007998.1-201ENST00000474156 672 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 RPL32P9-201ENST00000487963 407 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 GAPDHP56-201ENST00000506031 988 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC105384.2-201ENST00000508433 640 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 FGF7P4-201ENST00000509595 295 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 PCBP2P3-201ENST00000509726 843 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC110792.2-201ENST00000510278 224 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 RNA5SP401-201ENST00000515920 127 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 SNORA70.20-201ENST00000516848 126 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 SNORD60.2-201ENST00000516883 86 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC021678.3-201ENST00000517893 476 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC022690.1-201ENST00000526681 550 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC063949.1-201ENST00000552900 865 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 IGBP1P1-201ENST00000554337 1009 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC087477.6-201ENST00000559595 843 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC096996.1-201ENST00000563813 325 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 VN1R80P-201ENST00000597126 338 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC090607.5-201ENST00000615692 224 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AL356585.4-201ENST00000623078 1229 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC112204.3-201ENST00000623822 332 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC009902.3-201ENST00000606235 2172 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AL138820.1-201ENST00000617901 5305 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AC104118.1-201ENST00000607625 1589 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 Y_RNA.166-201ENST00000363730 102 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 RN7SKP224-201ENST00000364140 325 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 Y_RNA.460-201ENST00000384255 102 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 SNORA68.2-201ENST00000391263 128 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 HMGB1P20-201ENST00000402555 677 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AL354719.1-201ENST00000406535 843 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AL627308.1-201ENST00000435693 821 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AL356276.2-201ENST00000435919 558 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 TMEM248P1-201ENST00000510579 951 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 RNU6-1220P-201ENST00000517126 108 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AC037471.2-201ENST00000564941 598 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 MIR4795-201ENST00000584182 89 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AL513327.3-201ENST00000602618 469 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AC090574.1-201ENST00000623186 233 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AL159972.1-201ENST00000625150 448 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms