Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4□□□□□ -1.77
VCPP55072 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4□□□□□ -1.77
VCPP55072 AC005351.1-201ENST00000511152 786 ntBASIC4□□□□□ -1.77
VCPP55072 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4□□□□□ -1.77
VCPP55072 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4□□□□□ -1.77
VCPP55072 OR4A12P-201ENST00000530847 918 ntBASIC4□□□□□ -1.77
VCPP55072 AC092747.2-201ENST00000545069 983 ntBASIC4□□□□□ -1.77
VCPP55072 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4□□□□□ -1.77
VCPP55072 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4□□□□□ -1.77
VCPP55072 AC025260.1-201ENST00000548858 430 ntBASIC4□□□□□ -1.77
VCPP55072 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4□□□□□ -1.77
VCPP55072 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4□□□□□ -1.77
VCPP55072 AC104229.1-201ENST00000561364 255 ntBASIC4□□□□□ -1.77
VCPP55072 AP005205.1-201ENST00000563503 508 ntBASIC4□□□□□ -1.77
VCPP55072 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4□□□□□ -1.77
VCPP55072 AC090751.1-201ENST00000566966 267 ntBASIC4□□□□□ -1.77
VCPP55072 AC090079.2-201ENST00000575289 768 ntBASIC4□□□□□ -1.77
VCPP55072 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4□□□□□ -1.77
VCPP55072 AC006946.3-201ENST00000609791 756 ntBASIC4□□□□□ -1.77
VCPP55072 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
VCPP55072 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4□□□□□ -1.77
VCPP55072 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VCPP55072 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
VCPP55072 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4□□□□□ -1.77
VCPP55072 AC233263.6-201ENST00000631132 1963 ntBASIC4□□□□□ -1.77
VCPP55072 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VCPP55072 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VCPP55072 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.99□□□□□ -1.77
VCPP55072 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
VCPP55072 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VCPP55072 MTCO1P4-201ENST00000520516 1409 ntBASIC3.99□□□□□ -1.77
VCPP55072 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VCPP55072 RNA5SP51-201ENST00000364750 119 ntBASIC3.99□□□□□ -1.77
VCPP55072 RNU6-356P-201ENST00000384140 107 ntBASIC3.99□□□□□ -1.77
VCPP55072 ATF1P1-201ENST00000406040 927 ntBASIC3.99□□□□□ -1.77
VCPP55072 RNU2-6P-201ENST00000411404 190 ntBASIC3.99□□□□□ -1.77
VCPP55072 UBE2V1P11-201ENST00000411559 285 ntBASIC3.99□□□□□ -1.77
VCPP55072 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.99□□□□□ -1.77
VCPP55072 AL365396.1-201ENST00000430854 671 ntBASIC3.99□□□□□ -1.77
VCPP55072 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.99□□□□□ -1.77
VCPP55072 AC092641.1-201ENST00000440229 772 ntBASIC3.99□□□□□ -1.77
VCPP55072 MOB1AP2-201ENST00000446060 614 ntBASIC3.99□□□□□ -1.77
VCPP55072 RPL21P23-201ENST00000446654 460 ntBASIC3.99□□□□□ -1.77
VCPP55072 HMGN2P21-201ENST00000447764 270 ntBASIC3.99□□□□□ -1.77
VCPP55072 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.99□□□□□ -1.77
VCPP55072 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.99□□□□□ -1.77
VCPP55072 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.99□□□□□ -1.77
VCPP55072 AC084198.1-201ENST00000477747 402 ntBASIC3.99□□□□□ -1.77
VCPP55072 TRBV12-2-201ENST00000489763 344 ntBASIC3.99□□□□□ -1.77
VCPP55072 AC078817.1-201ENST00000492623 435 ntBASIC3.99□□□□□ -1.77
VCPP55072 NIPA2P2-201ENST00000496376 1083 ntBASIC3.99□□□□□ -1.77
VCPP55072 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.99□□□□□ -1.77
VCPP55072 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.99□□□□□ -1.77
VCPP55072 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.99□□□□□ -1.77
VCPP55072 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.99□□□□□ -1.77
VCPP55072 OR5AK3P-201ENST00000527486 1297 ntBASIC3.99□□□□□ -1.77
VCPP55072 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VCPP55072 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.99□□□□□ -1.77
VCPP55072 AC092451.2-201ENST00000538746 658 ntBASIC3.99□□□□□ -1.77
VCPP55072 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.99□□□□□ -1.77
VCPP55072 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.99□□□□□ -1.77
VCPP55072 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.99□□□□□ -1.77
VCPP55072 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.99□□□□□ -1.77
VCPP55072 BRDTP1-201ENST00000605735 677 ntBASIC3.99□□□□□ -1.77
VCPP55072 AC103710.3-201ENST00000608157 948 ntBASIC3.99□□□□□ -1.77
VCPP55072 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.99□□□□□ -1.77
VCPP55072 AC243312.2-201ENST00000623340 601 ntBASIC3.99□□□□□ -1.77
VCPP55072 AC091905.1-201ENST00000624400 311 ntBASIC3.99□□□□□ -1.77
VCPP55072 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.99□□□□□ -1.77
VCPP55072 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
VCPP55072 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VCPP55072 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.99□□□□□ -1.77
VCPP55072 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
VCPP55072 GABPAP-201ENST00000419271 1356 ntBASIC3.99□□□□□ -1.77
VCPP55072 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
VCPP55072 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.98□□□□□ -1.77
VCPP55072 AC008432.1-201ENST00000615912 1320 ntBASIC3.98□□□□□ -1.77
VCPP55072 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
VCPP55072 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VCPP55072 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VCPP55072 Y_RNA.510-201ENST00000384511 114 ntBASIC3.98□□□□□ -1.77
VCPP55072 HSPE1P8-201ENST00000406997 288 ntBASIC3.98□□□□□ -1.77
VCPP55072 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.98□□□□□ -1.77
VCPP55072 VTA1P1-201ENST00000414044 866 ntBASIC3.98□□□□□ -1.77
VCPP55072 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.98□□□□□ -1.77
VCPP55072 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.98□□□□□ -1.77
VCPP55072 RPL21P109-201ENST00000422213 475 ntBASIC3.98□□□□□ -1.77
VCPP55072 RPL7P29-201ENST00000437151 728 ntBASIC3.98□□□□□ -1.77
VCPP55072 AL831737.1-201ENST00000441288 271 ntBASIC3.98□□□□□ -1.77
VCPP55072 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VCPP55072 RPL7P55-201ENST00000450522 746 ntBASIC3.98□□□□□ -1.77
VCPP55072 DNAJC19P1-201ENST00000455312 319 ntBASIC3.98□□□□□ -1.77
VCPP55072 AC010307.1-201ENST00000467206 836 ntBASIC3.98□□□□□ -1.77
VCPP55072 RN7SL429P-201ENST00000479090 223 ntBASIC3.98□□□□□ -1.77
VCPP55072 RN7SL489P-201ENST00000486185 223 ntBASIC3.98□□□□□ -1.77
VCPP55072 RN7SL327P-201ENST00000488659 223 ntBASIC3.98□□□□□ -1.77
VCPP55072 AC005726.1-201ENST00000494679 427 ntBASIC3.98□□□□□ -1.77
VCPP55072 RPL5P23-201ENST00000496040 868 ntBASIC3.98□□□□□ -1.77
VCPP55072 SETP14-201ENST00000497538 873 ntBASIC3.98□□□□□ -1.77
VCPP55072 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms