Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU4-82P-201ENST00000362443 140 ntBASIC4.51□□□□□ -1.69
CLIP1P30622 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.51□□□□□ -1.69
CLIP1P30622 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.51□□□□□ -1.69
CLIP1P30622 AC003982.1-202ENST00000469928 248 ntBASIC4.51□□□□□ -1.69
CLIP1P30622 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLIP1P30622 AC126121.1-201ENST00000482313 553 ntBASIC4.51□□□□□ -1.69
CLIP1P30622 AF186190.1-201ENST00000517470 480 ntBASIC4.51□□□□□ -1.69
CLIP1P30622 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.51□□□□□ -1.69
CLIP1P30622 MIR5047-201ENST00000579212 100 ntBASIC4.51□□□□□ -1.69
CLIP1P30622 MIR3945-201ENST00000581853 98 ntBASIC4.51□□□□□ -1.69
CLIP1P30622 AC096947.1-201ENST00000603233 470 ntBASIC4.51□□□□□ -1.69
CLIP1P30622 OR6R2P-201ENST00000609216 300 ntBASIC4.51□□□□□ -1.69
CLIP1P30622 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.51□□□□□ -1.69
CLIP1P30622 MIR7153-201ENST00000637758 57 ntBASIC4.51□□□□□ -1.69
CLIP1P30622 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.51□□□□□ -1.69
CLIP1P30622 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.5□□□□□ -1.69
CLIP1P30622 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLIP1P30622 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.5□□□□□ -1.69
CLIP1P30622 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLIP1P30622 SETP10-201ENST00000424368 814 ntBASIC4.5□□□□□ -1.69
CLIP1P30622 MTCO1P52-201ENST00000433928 531 ntBASIC4.5□□□□□ -1.69
CLIP1P30622 RPS29P6-201ENST00000438196 145 ntBASIC4.5□□□□□ -1.69
CLIP1P30622 HMGB3P8-201ENST00000449709 577 ntBASIC4.5□□□□□ -1.69
CLIP1P30622 SLC31A1P1-201ENST00000451221 567 ntBASIC4.5□□□□□ -1.69
CLIP1P30622 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP1P30622 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.5□□□□□ -1.69
CLIP1P30622 GOLGA5P1-201ENST00000507317 980 ntBASIC4.5□□□□□ -1.69
CLIP1P30622 RPL23AP92-201ENST00000603609 255 ntBASIC4.5□□□□□ -1.69
CLIP1P30622 RNU6-859P-201ENST00000362728 107 ntBASIC4.49□□□□□ -1.69
CLIP1P30622 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.49□□□□□ -1.69
CLIP1P30622 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.49□□□□□ -1.69
CLIP1P30622 AC106872.2-201ENST00000494303 480 ntBASIC4.49□□□□□ -1.69
CLIP1P30622 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP1P30622 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP1P30622 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP1P30622 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP1P30622 AL049874.4-201ENST00000557593 255 ntBASIC4.49□□□□□ -1.69
CLIP1P30622 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP1P30622 AL355493.4-201ENST00000618530 292 ntBASIC4.49□□□□□ -1.69
CLIP1P30622 AC009039.2-201ENST00000624524 529 ntBASIC4.49□□□□□ -1.69
CLIP1P30622 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.49□□□□□ -1.69
CLIP1P30622 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP1P30622 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP1P30622 RNU1-112P-201ENST00000364401 164 ntBASIC4.48□□□□□ -1.69
CLIP1P30622 AL360182.1-201ENST00000397433 468 ntBASIC4.48□□□□□ -1.69
CLIP1P30622 IPMKP1-201ENST00000425988 855 ntBASIC4.48□□□□□ -1.69
CLIP1P30622 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.48□□□□□ -1.69
CLIP1P30622 AC010486.1-201ENST00000511793 424 ntBASIC4.48□□□□□ -1.69
CLIP1P30622 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CLIP1P30622 AC007954.1-201ENST00000554198 494 ntBASIC4.48□□□□□ -1.69
CLIP1P30622 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.48□□□□□ -1.69
CLIP1P30622 MIR4644-201ENST00000579929 84 ntBASIC4.48□□□□□ -1.69
CLIP1P30622 AC124856.1-201ENST00000600819 896 ntBASIC4.48□□□□□ -1.69
CLIP1P30622 AL139286.1-201ENST00000604465 483 ntBASIC4.48□□□□□ -1.69
CLIP1P30622 AL096803.3-201ENST00000609032 532 ntBASIC4.48□□□□□ -1.69
CLIP1P30622 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP1P30622 AC017002.4-201ENST00000604721 1525 ntBASIC4.48□□□□□ -1.69
CLIP1P30622 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CLIP1P30622 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP1P30622 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP1P30622 RNU1-35P-201ENST00000362782 153 ntBASIC4.47□□□□□ -1.69
CLIP1P30622 U3.12-201ENST00000364498 214 ntBASIC4.47□□□□□ -1.69
CLIP1P30622 MIR34A-201ENST00000385130 110 ntBASIC4.47□□□□□ -1.69
CLIP1P30622 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.47□□□□□ -1.69
CLIP1P30622 RPL32P28-201ENST00000443577 397 ntBASIC4.47□□□□□ -1.69
CLIP1P30622 RPS27P29-201ENST00000463110 252 ntBASIC4.47□□□□□ -1.69
CLIP1P30622 AC118282.1-201ENST00000506408 765 ntBASIC4.47□□□□□ -1.69
CLIP1P30622 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP1P30622 AC119751.1-201ENST00000513357 765 ntBASIC4.47□□□□□ -1.69
CLIP1P30622 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.47□□□□□ -1.69
CLIP1P30622 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP1P30622 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP1P30622 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.47□□□□□ -1.69
CLIP1P30622 BMS1P7-201ENST00000602440 1052 ntBASIC4.47□□□□□ -1.69
CLIP1P30622 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP1P30622 IGHVIII-44-202ENST00000636235 289 ntBASIC4.47□□□□□ -1.69
CLIP1P30622 AL353743.4-201ENST00000422653 1547 ntBASIC4.47□□□□□ -1.69
CLIP1P30622 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP1P30622 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLIP1P30622 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CLIP1P30622 MIR512-1-201ENST00000384913 84 ntBASIC4.46□□□□□ -1.69
CLIP1P30622 AL138827.1-201ENST00000402666 306 ntBASIC4.46□□□□□ -1.69
CLIP1P30622 RNA5SP21-201ENST00000410917 96 ntBASIC4.46□□□□□ -1.69
CLIP1P30622 AL139413.1-201ENST00000421309 217 ntBASIC4.46□□□□□ -1.69
CLIP1P30622 MTCO1P51-201ENST00000427672 1060 ntBASIC4.46□□□□□ -1.69
CLIP1P30622 SNORD109B-201ENST00000458961 67 ntBASIC4.46□□□□□ -1.69
CLIP1P30622 SNORD109A-201ENST00000459128 67 ntBASIC4.46□□□□□ -1.69
CLIP1P30622 KCTD9P5-201ENST00000504141 1170 ntBASIC4.46□□□□□ -1.69
CLIP1P30622 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.46□□□□□ -1.69
CLIP1P30622 AC007424.1-203ENST00000554613 687 ntBASIC4.46□□□□□ -1.69
CLIP1P30622 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.46□□□□□ -1.69
CLIP1P30622 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.46□□□□□ -1.69
CLIP1P30622 AC022960.2-201ENST00000616300 666 ntBASIC4.46□□□□□ -1.69
CLIP1P30622 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.46□□□□□ -1.69
CLIP1P30622 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.46□□□□□ -1.69
CLIP1P30622 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.46□□□□□ -1.69
CLIP1P30622 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.46□□□□□ -1.69
CLIP1P30622 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP1P30622 AC233263.6-201ENST00000631132 1963 ntBASIC4.46□□□□□ -1.7
CLIP1P30622 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms