Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC013267.1-201ENST00000458227 267 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 AC108161.1-201ENST00000461060 402 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 AC092754.1-201ENST00000472975 479 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 RPS17P5-201ENST00000498293 408 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 OR5H5P-201ENST00000503164 928 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 AC010587.1-201ENST00000505809 469 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC3P19447 PGBD4P4-201ENST00000509673 613 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC3P19447 AC009646.1-201ENST00000510455 318 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 AC105914.1-201ENST00000511798 226 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 AC004980.4-201ENST00000513375 203 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC3P19447 SNORD116-26-201ENST00000516006 96 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC3P19447 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC3P19447 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.14□□□□□ -1.43
ERCC3P19447 SETP2-201ENST00000553886 926 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.14□□□□□ -1.43
ERCC3P19447 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.14□□□□□ -1.43
ERCC3P19447 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.14□□□□□ -1.43
ERCC3P19447 U6.42-201ENST00000618440 107 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC3P19447 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ERCC3P19447 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC3P19447 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC3P19447 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC3P19447 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC3P19447 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
ERCC3P19447 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.13□□□□□ -1.43
ERCC3P19447 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
ERCC3P19447 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC3P19447 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC3P19447 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ERCC3P19447 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC3P19447 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC3P19447 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC3P19447 AC004817.4-201ENST00000602396 3625 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 RNY4P16-201ENST00000364768 94 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 RNU6-339P-201ENST00000384310 107 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 MIR105-1-201ENST00000385222 81 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ERCC3P19447 AC245052.5-201ENST00000416320 649 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 AC006548.1-201ENST00000427470 102 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 AC133104.1-201ENST00000429100 218 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.13□□□□□ -1.43
ERCC3P19447 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC3P19447 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.13□□□□□ -1.43
ERCC3P19447 AC108734.1-201ENST00000439549 399 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 MTATP6P23-201ENST00000440153 476 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC3P19447 AC003071.1-201ENST00000451219 789 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 AC092647.2-201ENST00000452998 253 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC3P19447 RPL31P58-201ENST00000469001 379 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC3P19447 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC3P19447 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC3P19447 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.13□□□□□ -1.43
ERCC3P19447 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.13□□□□□ -1.43
ERCC3P19447 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC3P19447 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC3P19447 SNORA59B-202ENST00000578183 701 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC3P19447 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC3P19447 MIR4480-201ENST00000582492 71 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.13□□□□□ -1.43
ERCC3P19447 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC3P19447 AC112230.1-201ENST00000604342 547 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 FAM25E-202ENST00000608562 189 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 AL355472.4-201ENST00000610233 626 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 MIR6820-201ENST00000611508 62 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 AC091905.1-201ENST00000624400 311 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 CR381572.1-201ENST00000625098 102 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ERCC3P19447 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.13□□□□□ -1.43
ERCC3P19447 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC3P19447 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ERCC3P19447 AL359893.1-201ENST00000447628 1580 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.13□□□□□ -1.43
ERCC3P19447 AC092376.2-201ENST00000622621 4116 ntBASIC6.13□□□□□ -1.43
ERCC3P19447 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC3P19447 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ERCC3P19447 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC3P19447 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ERCC3P19447 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC3P19447 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
ERCC3P19447 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC3P19447 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC3P19447 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC3P19447 RN7SKP185-201ENST00000362813 326 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 RNY1P12-201ENST00000364251 105 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ERCC3P19447 U3.29-201ENST00000391296 212 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 CALM2P3-201ENST00000400429 449 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 HSPA8P15-201ENST00000401676 786 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 IQCB2P-201ENST00000401788 1633 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC3P19447 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC3P19447 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms