Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC021146.4-201ENST00000309229 279 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 U3.4-201ENST00000363352 213 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 RNU6-723P-201ENST00000383973 107 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 MIR192-201ENST00000384915 110 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC007066.1-201ENST00000392902 381 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 MIR298-201ENST00000401212 88 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AL355379.1-201ENST00000405542 640 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC069218.2-201ENST00000411665 344 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 ZYG11AP1-201ENST00000430329 837 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AL359265.2-201ENST00000434367 631 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 UBE2FP3-201ENST00000436366 524 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AL513533.1-201ENST00000453728 415 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC010326.1-201ENST00000462726 602 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 RPL30P9-201ENST00000465586 330 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 RPL23AP2-201ENST00000471227 466 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 RN7SL860P-201ENST00000473738 223 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC104763.1-201ENST00000475274 360 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC010424.1-201ENST00000506336 297 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 RNU6-150P-201ENST00000516237 95 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 RN7SKP82-201ENST00000516786 223 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 HIGD1AP5-201ENST00000529959 259 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 OR5AN2P-201ENST00000534535 896 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC092851.1-201ENST00000535964 478 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC008127.2-201ENST00000549925 1075 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC234771.5-201ENST00000600161 514 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC068790.4-201ENST00000602474 263 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 MIR6780A-201ENST00000615089 68 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.29□□□□□ -1.72
DTX4Q9Y2E6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 CR383658.2-201ENST00000547576 1525 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 RNU6-462P-201ENST00000362659 105 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 Y_RNA.194-201ENST00000363985 102 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 MIR659-201ENST00000384963 97 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 NUP35P2-201ENST00000416748 943 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 AC083875.1-201ENST00000419509 405 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 AC069213.2-201ENST00000420238 366 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 AC092647.1-201ENST00000420654 287 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 MTND1P34-201ENST00000438556 671 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 COX6CP2-201ENST00000444980 225 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 EEF1E1P1-201ENST00000446998 430 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 AC009220.1-201ENST00000451614 275 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 HMGB3P21-201ENST00000452483 547 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 IFNWP4-201ENST00000453148 294 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 AC108751.2-201ENST00000469993 231 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 AC116337.2-201ENST00000477662 156 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 RPL23AP72-201ENST00000492447 435 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 AC114981.1-201ENST00000503897 678 ntBASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.28□□□□□ -1.72
DTX4Q9Y2E6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms