Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX2IPQ9Y2D8 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 RNU6-1151P-201ENST00000384684 107 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 RPL23AP48-201ENST00000406913 488 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 RPL7P8-201ENST00000411964 730 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC011933.1-201ENST00000413334 321 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 RPL23AP39-201ENST00000415533 405 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC234782.4-201ENST00000417646 1048 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 RPL17P36-201ENST00000420302 549 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC006366.1-201ENST00000422002 759 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 RGS17P1-201ENST00000423358 553 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AL049610.1-201ENST00000423374 372 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 NUTF2P7-201ENST00000453086 375 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC116533.1-201ENST00000459748 321 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 LTV1P1-201ENST00000510683 1237 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC008494.2-201ENST00000514544 370 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC060788.1-201ENST00000521318 469 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AL109766.1-201ENST00000555080 552 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC093519.1-201ENST00000566109 298 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC138915.2-201ENST00000569776 97 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 IPO5P1-202ENST00000600039 287 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC009878.1-201ENST00000621819 340 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 MTND4P26-201ENST00000415971 1359 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 AC135352.1-201ENST00000506173 1418 ntBASIC4.87□□□□□ -1.63
SSX2IPQ9Y2D8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AL445437.1-201ENST00000623157 3087 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 OR5H15-201ENST00000383696 930 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 SNORA70C-201ENST00000384538 135 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AL592291.1-201ENST00000403830 352 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AL603766.1-201ENST00000407763 664 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 RNU2-65P-201ENST00000410162 185 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 Y_RNA.619-201ENST00000410951 90 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 PIGPP2-201ENST00000411569 458 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC068533.2-201ENST00000411872 306 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 BOLA3P4-201ENST00000418151 400 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 ACTR3P2-201ENST00000439585 1257 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 RPL23AP93-201ENST00000440847 484 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AP000936.2-201ENST00000447151 681 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 ISCUP1-201ENST00000454451 448 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC005229.2-201ENST00000456995 399 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC116337.2-201ENST00000477662 156 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC109486.1-201ENST00000486833 374 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 RPL7P38-201ENST00000488396 739 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 MIR2116-201ENST00000517221 80 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 IGLVIV-65-201ENST00000517313 360 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC068446.3-201ENST00000555285 382 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AC006362.1-201ENST00000567392 174 ntBASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX2IPQ9Y2D8 ROCK1P1-201ENST00000573767 549 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms