Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TGIF1P1-201ENST00000558095 802 ntBASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 NIFKP8-201ENST00000560500 874 ntBASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 AL020997.3-201ENST00000602843 359 ntBASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 AC128687.1-201ENST00000605304 619 ntBASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 AP000894.4-201ENST00000610185 483 ntBASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 AC100827.5-201ENST00000615883 426 ntBASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 AC093875.1-201ENST00000623688 504 ntBASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 AL590396.4-201ENST00000636779 956 ntBASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.51□□□□□ -2.01
SND1-IT1Q9HBX3 AC118273.1-201ENST00000525324 3006 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RNA5SP258-201ENST00000362750 119 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RNU6-115P-201ENST00000364310 107 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RNA5SP509-201ENST00000364577 119 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 MIR591-201ENST00000385290 95 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AL136116.1-201ENST00000403591 381 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AL139098.1-201ENST00000407291 389 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 MTHFD2P2-201ENST00000407725 247 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AL023807.1-201ENST00000407932 359 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RNA5SP129-201ENST00000410276 118 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 ELOCP19-201ENST00000411919 318 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AL139128.1-201ENST00000413921 941 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RPS7P15-201ENST00000415804 584 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RPL17P36-201ENST00000420302 549 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 FNDC3CP-201ENST00000420795 1155 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC246680.2-201ENST00000422106 389 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AL158071.1-201ENST00000430315 461 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 HMGN2P20-201ENST00000437531 273 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AL772161.1-201ENST00000439130 476 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AL158053.1-201ENST00000441503 453 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC044797.1-201ENST00000445744 679 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 MOB1AP2-201ENST00000446060 614 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RPL35AP28-201ENST00000459730 331 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC011276.1-201ENST00000469688 323 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC022034.3-201ENST00000471393 478 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 UQCRHP4-201ENST00000471686 272 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RPS27AP1-201ENST00000475545 471 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RPS4XP22-201ENST00000480755 780 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RPS3AP50-201ENST00000487064 803 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RPL32P9-201ENST00000487963 407 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 ZNF705CP-201ENST00000530515 889 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AGGF1P6-201ENST00000569213 976 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC006116.5-201ENST00000591936 559 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 IPO5P1-202ENST00000600039 287 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC002487.1-201ENST00000604565 994 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC091167.4-201ENST00000605079 184 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC073968.1-201ENST00000618594 637 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AC092650.2-201ENST00000619984 902 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 MIR8059-201ENST00000620427 81 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 MIR3653-201ENST00000625572 110 ntBASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SND1-IT1Q9HBX3 AL512283.1-201ENST00000606756 1384 ntBASIC2.49□□□□□ -2.01
SND1-IT1Q9HBX3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SND1-IT1Q9HBX3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SND1-IT1Q9HBX3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC2.49□□□□□ -2.01
SND1-IT1Q9HBX3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SND1-IT1Q9HBX3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.49□□□□□ -2.01
SND1-IT1Q9HBX3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
SND1-IT1Q9HBX3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.49□□□□□ -2.01
SND1-IT1Q9HBX3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SND1-IT1Q9HBX3 RNU6-50P-201ENST00000362356 103 ntBASIC2.49□□□□□ -2.01
SND1-IT1Q9HBX3 RNU6-989P-201ENST00000362756 107 ntBASIC2.49□□□□□ -2.01
SND1-IT1Q9HBX3 DEFB109C-201ENST00000382575 264 ntBASIC2.49□□□□□ -2.01
SND1-IT1Q9HBX3 DEFB109B-201ENST00000382656 264 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms