Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 MIR4298-201ENST00000584380 73 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC018638.8-201ENST00000588755 281 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC093799.2-201ENST00000610062 578 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 ASNSP1-204ENST00000641977 1664 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 AC092747.4-201ENST00000620519 1861 ntBASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNGAP1Q96PV0 RNA5SP123-201ENST00000363244 119 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 SNORA70.6-201ENST00000383934 134 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 SNORD56.6-201ENST00000384569 71 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 MIR506-201ENST00000384998 124 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 MIR1305-201ENST00000408300 86 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 RNA5SP118-201ENST00000410385 109 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 DDX39BP1-205ENST00000422507 192 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC104837.2-201ENST00000427236 424 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 SNRPCP3-201ENST00000474888 476 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 RPL36AP51-201ENST00000487216 318 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 COX6B1P6-201ENST00000522347 255 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC011611.1-201ENST00000552179 197 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC109446.4-201ENST00000623235 2755 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC007996.1-201ENST00000620414 2821 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC025574.1-201ENST00000554784 1653 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AL079305.1-201ENST00000623159 3008 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 AC024560.2-201ENST00000507981 1497 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 HSPA8P14-201ENST00000552265 1805 ntBASIC6□□□□□ -1.45
SYNGAP1Q96PV0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNGAP1Q96PV0 U3.3-201ENST00000362986 216 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RNU6-317P-201ENST00000384031 107 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 Y_RNA.431-201ENST00000384086 102 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RNU6-456P-201ENST00000384493 107 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AL122016.1-201ENST00000403365 367 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RPL7P57-201ENST00000423238 740 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 EIF1P3-201ENST00000423841 334 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 MRPS21P2-201ENST00000424704 264 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 VTI1BP4-201ENST00000427516 527 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 BNIP3P2-201ENST00000441221 577 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RPL7P12-201ENST00000446719 750 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 BX842559.2-201ENST00000451418 605 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC079168.1-201ENST00000458741 345 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 RPL7P19-201ENST00000469948 618 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC006499.2-201ENST00000513470 337 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC034159.1-201ENST00000513885 583 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 SNORA70.11-201ENST00000515987 138 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 SNORA70.13-201ENST00000516116 138 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC105029.1-201ENST00000520250 669 ntBASIC5.99□□□□□ -1.45
SYNGAP1Q96PV0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms