Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 XPOTP1-201ENST00000443317 2398 ntBASIC4.12□□□□□ -1.75
SLC44A1Q8WWI5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SLC44A1Q8WWI5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 RNU6-621P-201ENST00000364752 109 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 RNU1-89P-201ENST00000384592 164 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 RSL24D1P4-201ENST00000400938 484 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 HNRNPDP2-201ENST00000406475 478 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AL133264.1-201ENST00000407157 562 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 PRELID3BP11-201ENST00000414230 479 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 LUZP4P1-201ENST00000415420 344 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 RPL7P53-201ENST00000421245 739 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AL139421.1-201ENST00000423010 169 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 MTND5P25-201ENST00000430499 799 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC091390.1-201ENST00000433904 331 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 RNA5SP246-201ENST00000458909 119 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 RN7SL271P-201ENST00000487601 295 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AF213884.1-201ENST00000488102 463 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC026979.1-201ENST00000492525 396 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 RPL30P11-201ENST00000495304 339 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 FTH1P24-201ENST00000503502 462 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC011352.3-201ENST00000505162 593 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 RN7SKP31-201ENST00000516354 278 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 MTCYBP27-201ENST00000555160 670 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 DUXAP1-201ENST00000556632 463 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC093519.1-201ENST00000566109 298 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC022968.1-201ENST00000567372 442 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC002400.1-201ENST00000569310 726 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC012417.1-201ENST00000582307 1039 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC022069.1-201ENST00000582910 658 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 MIR4697-201ENST00000582977 78 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 BNIP3P24-201ENST00000593398 557 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC009220.3-201ENST00000604318 586 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC022079.1-201ENST00000621546 602 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC073348.1-201ENST00000623002 331 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC000123.2-201ENST00000623124 461 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC026634.1-201ENST00000634369 198 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AF001550.2-201ENST00000636643 217 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 AC025125.1-201ENST00000624743 1922 ntBASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC44A1Q8WWI5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC106871.1-201ENST00000568324 3102 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 RNA5SP322-201ENST00000363617 119 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 RNU6-115P-201ENST00000364310 107 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AL121978.1-201ENST00000402778 359 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 ELOCP19-201ENST00000411919 318 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AL161449.1-201ENST00000414531 1199 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC008280.1-201ENST00000418851 412 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC006960.1-201ENST00000419980 153 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 CHIAP3-201ENST00000423668 1133 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 IFNNP1-201ENST00000429219 553 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC023347.2-201ENST00000433994 462 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC096638.2-201ENST00000434965 711 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC006011.1-201ENST00000442758 349 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC104090.1-201ENST00000506341 1171 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC020593.1-201ENST00000507399 299 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC008958.1-201ENST00000511047 682 ntBASIC4.1□□□□□ -1.75
SLC44A1Q8WWI5 AC116353.3-201ENST00000511215 249 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms