Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC233702.1-201ENST00000482905 502 ntBASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AC004453.1-201ENST00000487895 408 ntBASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AC231760.1-201ENST00000498002 260 ntBASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 NPM1P41-201ENST00000512920 831 ntBASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AC104785.1-201ENST00000603220 588 ntBASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 CYP2C61P-201ENST00000604072 290 ntBASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SHKBP1Q8TBC3 AL137141.1-201ENST00000624622 4836 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 OR11H5P-202ENST00000641612 1325 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC068870.3-201ENST00000625077 2536 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 Y_RNA.149-201ENST00000363558 117 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AL121972.1-201ENST00000402023 252 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 RPL7P25-201ENST00000404151 721 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AL133388.1-201ENST00000404509 287 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 HSPE1P1-201ENST00000421494 318 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 SRSF1P1-201ENST00000424058 520 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 RPS27P18-201ENST00000431701 247 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 RSU1P2-202ENST00000437884 485 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 TXNP5-201ENST00000441043 315 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 MTATP8P1-201ENST00000467115 207 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 CR383656.1-201ENST00000484916 377 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 HMGB1P30-201ENST00000492455 606 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 SMURF2P1-201ENST00000514992 481 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC097486.1-201ENST00000515331 210 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AP005902.1-201ENST00000521358 186 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AP001804.2-201ENST00000533932 910 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC093519.1-201ENST00000566109 298 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 MIR3691-201ENST00000578066 90 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 MIR3167-201ENST00000579623 85 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC024940.4-201ENST00000605507 246 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC009318.4-201ENST00000620496 486 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC244517.12-201ENST00000623581 663 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AL359757.2-201ENST00000624309 274 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC119674.1-212ENST00000641155 993 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC012618.3-205ENST00000637896 1496 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC104964.3-201ENST00000606115 2860 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AL591135.1-201ENST00000401578 5914 ntBASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.74□□□□□ -1.49
SHKBP1Q8TBC3 MAPK10-338ENST00000641647 3362 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 SNORA63.7-201ENST00000365579 123 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 MIR765-201ENST00000390226 114 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 RNU6-985P-201ENST00000410182 104 ntBASIC5.73□□□□□ -1.49
SHKBP1Q8TBC3 RNU2-9P-201ENST00000410194 145 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms