Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 AP001148.1-201ENST00000624124 2359 ntBASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUP54Q7Z3B4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
NUP54Q7Z3B4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.96□□□□□ -1.77
NUP54Q7Z3B4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AL158163.1-201ENST00000603915 1649 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 RNA5SP366-201ENST00000365454 123 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 SUGT1P1-201ENST00000379514 476 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 RNU6-921P-201ENST00000384361 107 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 RNU6-636P-201ENST00000384598 107 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 ERHP2-201ENST00000402323 299 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 OR2X1P-201ENST00000421144 687 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AL157831.1-201ENST00000426134 473 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 RPL21P66-201ENST00000426566 466 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 VDAC1P6-201ENST00000430062 855 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 PRELID3BP10-201ENST00000431957 584 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 RPEP2-201ENST00000432149 701 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 VDAC1P3-201ENST00000434069 851 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AC084290.1-201ENST00000434995 374 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AC241584.1-201ENST00000438469 1241 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AC093155.1-201ENST00000440164 826 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 MTCO3P35-201ENST00000485582 781 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AC114322.1-201ENST00000506771 926 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 IGKV2D-36-201ENST00000518643 226 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AC109635.4-202ENST00000531666 412 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 MTCYBP27-201ENST00000555160 670 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 CYP4A43P-201ENST00000568156 121 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 MIR4644-201ENST00000579929 84 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 MIR3690-201ENST00000580266 75 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AL669831.4-202ENST00000590817 238 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AC013244.3-201ENST00000605614 388 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AC023158.2-201ENST00000614876 543 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 SNX18P1Y-201ENST00000616231 511 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 AC006963.1-201ENST00000624003 1052 ntBASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NUP54Q7Z3B4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 NACA3P-201ENST00000359690 648 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 RNU6-251P-201ENST00000363235 104 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 RNU1-132P-201ENST00000364300 164 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 SNORA62-201ENST00000365493 153 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 RNA5SP56-201ENST00000410277 118 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 RPS3AP25-201ENST00000411660 793 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 RPS23P10-201ENST00000416185 486 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 BOLA3P4-201ENST00000418151 400 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 RPS3AP54-201ENST00000435535 734 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 EXTL2P1-201ENST00000446218 416 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 RPL23AP62-201ENST00000463396 453 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 RPS23P7-201ENST00000466210 444 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC011979.1-201ENST00000472300 483 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC078785.3-201ENST00000476607 425 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC146944.2-203ENST00000502493 354 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 BNIP3P41-201ENST00000503774 571 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms