Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL161631.1-201ENST00000417933 486 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 RPS15AP40-201ENST00000419621 391 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.44□□□□□ -1.7
HDAC4P56524 RBMY1KP-201ENST00000423480 476 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 AC093155.1-201ENST00000440164 826 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 NF1P3-201ENST00000457709 450 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.44□□□□□ -1.7
HDAC4P56524 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.44□□□□□ -1.7
HDAC4P56524 RPL35P6-201ENST00000490024 372 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.44□□□□□ -1.7
HDAC4P56524 AC010486.2-201ENST00000505572 483 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 AL592156.1-201ENST00000508758 304 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 MTCYBP16-201ENST00000509187 1129 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 AC006499.6-201ENST00000511169 607 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.44□□□□□ -1.7
HDAC4P56524 RNA5SP49-201ENST00000516450 115 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 RNA5SP519-201ENST00000516480 119 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 RNA5SP73-201ENST00000516744 108 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 AC087808.1-201ENST00000520501 361 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
HDAC4P56524 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.44□□□□□ -1.7
HDAC4P56524 NBEAP1-201ENST00000554452 979 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 AC005412.1-201ENST00000580812 1049 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 AL390838.2-201ENST00000602394 274 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.44□□□□□ -1.7
HDAC4P56524 AC010680.4-201ENST00000605334 543 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 AP003117.2-201ENST00000606010 545 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.44□□□□□ -1.7
HDAC4P56524 AC011944.2-201ENST00000624440 683 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 AC068724.3-201ENST00000625906 87 ntBASIC4.44□□□□□ -1.7
HDAC4P56524 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HDAC4P56524 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.44□□□□□ -1.7
HDAC4P56524 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.44□□□□□ -1.7
HDAC4P56524 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HDAC4P56524 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.44□□□□□ -1.7
HDAC4P56524 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.44□□□□□ -1.7
HDAC4P56524 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.44□□□□□ -1.7
HDAC4P56524 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HDAC4P56524 AC016588.2-201ENST00000632484 3021 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.43□□□□□ -1.7
HDAC4P56524 ZNF33CP-201ENST00000432492 2030 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AC107081.3-201ENST00000612715 2034 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HDAC4P56524 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC4P56524 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC4P56524 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC4P56524 RNU6-1066P-201ENST00000363573 105 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 SNORD74.4-201ENST00000364129 80 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 RNU4-40P-201ENST00000364351 143 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 RNU6-157P-201ENST00000383957 107 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 RNU6-444P-201ENST00000383988 108 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 RNY3P9-201ENST00000384727 106 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 MIR23B-201ENST00000384832 97 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AL133264.1-201ENST00000407157 562 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 RNA5SP80-201ENST00000410475 111 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 RNU4-25P-201ENST00000410569 230 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AC233981.1-201ENST00000423224 461 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.43□□□□□ -1.7
HDAC4P56524 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.43□□□□□ -1.7
HDAC4P56524 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.43□□□□□ -1.7
HDAC4P56524 AL008629.1-201ENST00000438615 184 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.43□□□□□ -1.7
HDAC4P56524 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.43□□□□□ -1.7
HDAC4P56524 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.43□□□□□ -1.7
HDAC4P56524 snoU13.7-201ENST00000459220 104 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HDAC4P56524 AC041039.1-201ENST00000485656 536 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 RPL5P23-201ENST00000496040 868 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AC104090.1-201ENST00000506341 1171 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AC008958.1-201ENST00000511047 682 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.43□□□□□ -1.7
HDAC4P56524 RNU6-1129P-201ENST00000515964 104 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.43□□□□□ -1.7
HDAC4P56524 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.43□□□□□ -1.7
HDAC4P56524 AC007834.2-201ENST00000536310 343 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.43□□□□□ -1.7
HDAC4P56524 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.43□□□□□ -1.7
HDAC4P56524 MIR4644-201ENST00000579929 84 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AC008088.1-201ENST00000580993 280 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AP001180.3-201ENST00000582221 145 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.43□□□□□ -1.7
HDAC4P56524 AC097478.2-201ENST00000610572 514 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AC093783.1-201ENST00000612976 329 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AL512506.2-201ENST00000624472 458 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.43□□□□□ -1.7
HDAC4P56524 MIR6830-201ENST00000636015 70 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC4P56524 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.43□□□□□ -1.7
HDAC4P56524 AC104454.1-201ENST00000421341 1401 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 AC012321.1-201ENST00000561622 1588 ntBASIC4.43□□□□□ -1.7
HDAC4P56524 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HDAC4P56524 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC4P56524 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.43□□□□□ -1.7
HDAC4P56524 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC4P56524 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC4P56524 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HDAC4P56524 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HDAC4P56524 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HDAC4P56524 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms