Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RN7SKP167-201ENST00000411047 285 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.36□□□□□ -1.71
NR1H2P55055 AL590139.1-201ENST00000416267 400 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 EI24P1-201ENST00000416584 867 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 AIMP1P1-201ENST00000418670 937 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 UBTFL3-201ENST00000418934 1024 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 RPL7P57-201ENST00000423238 740 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 CENPIP1-201ENST00000425713 902 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 AC016712.1-201ENST00000431088 378 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 USP9YP7-201ENST00000436723 430 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 AL138878.2-201ENST00000440581 1241 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 SLC25A18P1-201ENST00000449385 454 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 USP9YP32-201ENST00000452432 430 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.36□□□□□ -1.71
NR1H2P55055 UBTFL6-201ENST00000477929 1024 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
NR1H2P55055 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1H2P55055 AC007016.1-201ENST00000512110 244 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 AC023141.12-201ENST00000512399 199 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1H2P55055 FKBP1BP1-201ENST00000553366 325 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 UBE2FP2-201ENST00000566646 462 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.36□□□□□ -1.71
NR1H2P55055 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1H2P55055 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1H2P55055 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1H2P55055 AC026368.1-201ENST00000614934 690 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 MIR7703-201ENST00000620784 77 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 AC231657.1-201ENST00000624313 397 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1H2P55055 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NR1H2P55055 AL356473.1-201ENST00000406203 1408 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1H2P55055 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.36□□□□□ -1.71
NR1H2P55055 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.36□□□□□ -1.71
NR1H2P55055 KARSP3-201ENST00000571212 1504 ntBASIC4.36□□□□□ -1.71
NR1H2P55055 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NR1H2P55055 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NR1H2P55055 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.35□□□□□ -1.71
NR1H2P55055 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.35□□□□□ -1.71
NR1H2P55055 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NR1H2P55055 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.35□□□□□ -1.71
NR1H2P55055 AC027290.2-201ENST00000623210 18662 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NR1H2P55055 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
NR1H2P55055 RNU1-32P-201ENST00000363937 159 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
NR1H2P55055 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.35□□□□□ -1.71
NR1H2P55055 AL356131.1-201ENST00000405826 414 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 RAC1P3-201ENST00000416129 580 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.35□□□□□ -1.71
NR1H2P55055 MTND2P18-201ENST00000419962 1030 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 PTP4A1P5-201ENST00000420305 455 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 VN1R32P-201ENST00000452234 905 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 SUMO2P2-201ENST00000456482 255 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 FAM172BP-201ENST00000487497 1089 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NR1H2P55055 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.35□□□□□ -1.71
NR1H2P55055 XKRY-201ENST00000510392 1100 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.35□□□□□ -1.71
NR1H2P55055 RNU6-1129P-201ENST00000515964 104 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 RNA5SP497-201ENST00000516081 97 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 AC105185.1-201ENST00000518705 535 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 AC091042.1-201ENST00000579213 173 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.35□□□□□ -1.71
NR1H2P55055 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.35□□□□□ -1.71
NR1H2P55055 AC005255.1-201ENST00000593748 216 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 AC068790.4-201ENST00000602474 263 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 AC103858.2-201ENST00000621471 543 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 AP000676.3-201ENST00000623299 569 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 MIR7641-1-201ENST00000627518 61 ntBASIC4.35□□□□□ -1.71
NR1H2P55055 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.35□□□□□ -1.71
NR1H2P55055 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.35□□□□□ -1.71
NR1H2P55055 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NR1H2P55055 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NR1H2P55055 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.35□□□□□ -1.71
NR1H2P55055 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NR1H2P55055 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NR1H2P55055 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.34□□□□□ -1.71
NR1H2P55055 AC099654.2-201ENST00000433031 1980 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
NR1H2P55055 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.34□□□□□ -1.71
NR1H2P55055 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.34□□□□□ -1.71
NR1H2P55055 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NR1H2P55055 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NR1H2P55055 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NR1H2P55055 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NR1H2P55055 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NR1H2P55055 AC126755.2-208ENST00000327792 462 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC138969.1-213ENST00000331436 462 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 RPL32P3-201ENST00000359025 275 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 RNA5SP167-201ENST00000365461 116 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.34□□□□□ -1.71
NR1H2P55055 MIR708-201ENST00000390708 88 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 RPS16P5-201ENST00000406501 404 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.34□□□□□ -1.71
NR1H2P55055 RPL23AP48-201ENST00000406913 488 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1H2P55055 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms