Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RAD17P1-201ENST00000418130 2042 ntBASIC4.69□□□□□ -1.66
COPB1P53618 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COPB1P53618 AL512646.1-201ENST00000269395 1077 ntBASIC4.69□□□□□ -1.66
COPB1P53618 AC079741.1-201ENST00000321498 212 ntBASIC4.69□□□□□ -1.66
COPB1P53618 AL672167.1-206ENST00000356293 943 ntBASIC4.69□□□□□ -1.66
COPB1P53618 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COPB1P53618 RNU4-21P-201ENST00000362802 126 ntBASIC4.69□□□□□ -1.66
COPB1P53618 RNU6-1066P-201ENST00000363573 105 ntBASIC4.69□□□□□ -1.66
COPB1P53618 RNA5SP175-201ENST00000364275 119 ntBASIC4.69□□□□□ -1.66
COPB1P53618 RNA5SP505-201ENST00000364748 108 ntBASIC4.69□□□□□ -1.66
COPB1P53618 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COPB1P53618 AL121978.1-201ENST00000402778 359 ntBASIC4.69□□□□□ -1.66
COPB1P53618 AL139098.1-201ENST00000407291 389 ntBASIC4.69□□□□□ -1.66
COPB1P53618 MTCO3P41-201ENST00000414801 328 ntBASIC4.69□□□□□ -1.66
COPB1P53618 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.69□□□□□ -1.66
COPB1P53618 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COPB1P53618 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.69□□□□□ -1.66
COPB1P53618 AC069285.2-201ENST00000440210 275 ntBASIC4.69□□□□□ -1.66
COPB1P53618 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.69□□□□□ -1.66
COPB1P53618 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
COPB1P53618 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.69□□□□□ -1.66
COPB1P53618 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.69□□□□□ -1.66
COPB1P53618 AC109486.1-201ENST00000486833 374 ntBASIC4.69□□□□□ -1.66
COPB1P53618 AC068724.1-201ENST00000487100 792 ntBASIC4.69□□□□□ -1.66
COPB1P53618 AC025445.1-201ENST00000502728 300 ntBASIC4.69□□□□□ -1.66
COPB1P53618 Y_RNA.695-201ENST00000516715 107 ntBASIC4.69□□□□□ -1.66
COPB1P53618 HIGD1AP6-201ENST00000521833 279 ntBASIC4.69□□□□□ -1.66
COPB1P53618 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
COPB1P53618 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.69□□□□□ -1.66
COPB1P53618 OR7K1P-201ENST00000546439 926 ntBASIC4.69□□□□□ -1.66
COPB1P53618 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.69□□□□□ -1.66
COPB1P53618 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COPB1P53618 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.69□□□□□ -1.66
COPB1P53618 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.69□□□□□ -1.66
COPB1P53618 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.69□□□□□ -1.66
COPB1P53618 AP000254.1-201ENST00000609934 520 ntBASIC4.69□□□□□ -1.66
COPB1P53618 AC104073.3-201ENST00000610942 955 ntBASIC4.69□□□□□ -1.66
COPB1P53618 AC009704.2-201ENST00000618739 483 ntBASIC4.69□□□□□ -1.66
COPB1P53618 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.69□□□□□ -1.66
COPB1P53618 AC090582.1-201ENST00000636321 199 ntBASIC4.69□□□□□ -1.66
COPB1P53618 MKKS-204ENST00000639674 192 ntBASIC4.69□□□□□ -1.66
COPB1P53618 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COPB1P53618 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.69□□□□□ -1.66
COPB1P53618 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COPB1P53618 AC068254.2-201ENST00000623938 3577 ntBASIC4.69□□□□□ -1.66
COPB1P53618 AC097504.1-201ENST00000515103 2415 ntBASIC4.68□□□□□ -1.66
COPB1P53618 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPB1P53618 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPB1P53618 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPB1P53618 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPB1P53618 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COPB1P53618 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPB1P53618 AL353743.4-201ENST00000422653 1547 ntBASIC4.68□□□□□ -1.66
COPB1P53618 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COPB1P53618 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPB1P53618 OR52B1P-201ENST00000316506 909 ntBASIC4.68□□□□□ -1.66
COPB1P53618 MIR331-201ENST00000362302 94 ntBASIC4.68□□□□□ -1.66
COPB1P53618 SNORA4.1-201ENST00000364263 144 ntBASIC4.68□□□□□ -1.66
COPB1P53618 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPB1P53618 Y_RNA.559-201ENST00000384686 107 ntBASIC4.68□□□□□ -1.66
COPB1P53618 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
COPB1P53618 AL512430.2-201ENST00000406786 339 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AL133264.1-201ENST00000407157 562 ntBASIC4.68□□□□□ -1.66
COPB1P53618 RPL23AP47-201ENST00000408017 460 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AL450992.3-201ENST00000413192 568 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.68□□□□□ -1.66
COPB1P53618 AC004552.1-201ENST00000419089 348 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC048351.1-201ENST00000420064 602 ntBASIC4.68□□□□□ -1.66
COPB1P53618 Z99497.1-201ENST00000421282 135 ntBASIC4.68□□□□□ -1.66
COPB1P53618 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.68□□□□□ -1.66
COPB1P53618 RPS3AP44-201ENST00000425466 790 ntBASIC4.68□□□□□ -1.66
COPB1P53618 RPL31P54-201ENST00000429803 370 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC016712.1-201ENST00000431088 378 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.68□□□□□ -1.66
COPB1P53618 AL031663.1-201ENST00000437445 219 ntBASIC4.68□□□□□ -1.66
COPB1P53618 RPS24P1-201ENST00000438550 371 ntBASIC4.68□□□□□ -1.66
COPB1P53618 MTCO1P19-201ENST00000443487 500 ntBASIC4.68□□□□□ -1.66
COPB1P53618 MTND1P27-201ENST00000451117 902 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.68□□□□□ -1.66
COPB1P53618 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.68□□□□□ -1.66
COPB1P53618 RPS26P3-201ENST00000470205 348 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC006517.1-201ENST00000480485 328 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC090543.2-201ENST00000483963 348 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC004057.1-201ENST00000485827 348 ntBASIC4.68□□□□□ -1.66
COPB1P53618 RPL7P38-201ENST00000488396 739 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.68□□□□□ -1.66
COPB1P53618 AC113430.1-201ENST00000506872 718 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC010625.1-201ENST00000511296 403 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC010285.3-201ENST00000511668 676 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.68□□□□□ -1.66
COPB1P53618 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
COPB1P53618 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.68□□□□□ -1.66
COPB1P53618 DYNLL1P4-201ENST00000549314 266 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.68□□□□□ -1.66
COPB1P53618 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COPB1P53618 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.68□□□□□ -1.66
COPB1P53618 AC012435.1-202ENST00000568772 240 ntBASIC4.68□□□□□ -1.66
COPB1P53618 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COPB1P53618 VN1R92P-201ENST00000598511 928 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC008745.1-201ENST00000604064 271 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms