Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM23P36406 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TRIM23P36406 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM23P36406 U6.112-201ENST00000384129 70 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 RNU6-356P-201ENST00000384140 107 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 ATP5F1P3-201ENST00000397213 657 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 RNU2-21P-201ENST00000410368 188 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 RNU6-77P-201ENST00000410554 91 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 RNU6-272P-201ENST00000411028 104 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 RAB9AP3-201ENST00000412737 573 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM23P36406 OR4F13P-201ENST00000428478 931 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 FO393414.1-201ENST00000428697 1184 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM23P36406 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM23P36406 TPTE2P3-201ENST00000441562 1189 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.79□□□□□ -1.8
TRIM23P36406 AL592437.1-201ENST00000443781 492 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 MTND1P33-201ENST00000446251 917 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 AL929288.2-201ENST00000446368 407 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 RPS17P13-201ENST00000448974 407 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 RAB9AP1-201ENST00000449393 573 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM23P36406 AC108941.1-201ENST00000502853 530 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM23P36406 NAMPTP2-201ENST00000505629 1115 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM23P36406 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM23P36406 RNU6-1231P-201ENST00000517185 103 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.79□□□□□ -1.8
TRIM23P36406 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM23P36406 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM23P36406 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM23P36406 MIR3186-201ENST00000577404 85 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM23P36406 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM23P36406 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM23P36406 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM23P36406 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM23P36406 AC128687.2-201ENST00000609657 566 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 AL591424.2-201ENST00000617023 128 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 CR392039.5-201ENST00000623201 510 ntBASIC3.79□□□□□ -1.8
TRIM23P36406 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM23P36406 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM23P36406 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM23P36406 UBE3AP2-201ENST00000429033 2259 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM23P36406 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
TRIM23P36406 AC016716.1-201ENST00000265882 708 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 RNU5B-4P-201ENST00000363508 111 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 RNU6-236P-201ENST00000363886 106 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TRIM23P36406 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TRIM23P36406 AC069282.1-201ENST00000411911 526 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM23P36406 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
TRIM23P36406 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM23P36406 PSMA2P3-201ENST00000429685 675 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM23P36406 HMGB3P22-202ENST00000451823 572 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 BX276092.4-201ENST00000452056 248 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 UBDP1-202ENST00000457888 382 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 RPL7P15-201ENST00000461190 712 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM23P36406 AC015724.1-201ENST00000478577 156 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 AC093801.2-201ENST00000503966 1050 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM23P36406 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM23P36406 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 RN7SKP277-201ENST00000516895 283 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM23P36406 MTND2P26-201ENST00000528255 1029 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.78□□□□□ -1.8
TRIM23P36406 ZNF192P1-203ENST00000565888 810 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 AC023824.3-201ENST00000569003 562 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM23P36406 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM23P36406 BNIP3P27-201ENST00000599991 412 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 MRPS35P3-201ENST00000603189 709 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 RNU1-30P-201ENST00000606575 163 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 AC124016.2-201ENST00000610058 665 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 AL049777.1-201ENST00000622740 518 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM23P36406 MIR4278-201ENST00000636094 69 ntBASIC3.78□□□□□ -1.8
TRIM23P36406 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM23P36406 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM23P36406 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM23P36406 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM23P36406 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.81
TRIM23P36406 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM23P36406 SAGE4P-201ENST00000442271 3381 ntBASIC3.77□□□□□ -1.81
TRIM23P36406 IPO8P1-201ENST00000455509 3109 ntBASIC3.77□□□□□ -1.81
TRIM23P36406 AC138915.3-201ENST00000562908 1389 ntBASIC3.77□□□□□ -1.81
TRIM23P36406 AC025263.3-201ENST00000622965 1396 ntBASIC3.77□□□□□ -1.81
TRIM23P36406 AC011978.2-201ENST00000569835 2054 ntBASIC3.77□□□□□ -1.81
TRIM23P36406 PRO1804-201ENST00000623780 2050 ntBASIC3.77□□□□□ -1.81
TRIM23P36406 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM23P36406 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM23P36406 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM23P36406 RNA5SP124-201ENST00000362739 110 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms