Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC019097.1-201ENST00000424783 735 ntBASIC4.58□□□□□ -1.68
SCAPERQ9BY12 AC073508.1-201ENST00000428866 656 ntBASIC4.58□□□□□ -1.68
SCAPERQ9BY12 SETP12-201ENST00000514068 805 ntBASIC4.58□□□□□ -1.68
SCAPERQ9BY12 RNU1-41P-201ENST00000516161 162 ntBASIC4.58□□□□□ -1.68
SCAPERQ9BY12 RNU1-48P-201ENST00000516400 162 ntBASIC4.58□□□□□ -1.68
SCAPERQ9BY12 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.58□□□□□ -1.68
SCAPERQ9BY12 AC112503.1-201ENST00000608436 391 ntBASIC4.58□□□□□ -1.68
SCAPERQ9BY12 ZNF826P-207ENST00000622273 1910 ntBASIC4.58□□□□□ -1.68
SCAPERQ9BY12 AC093311.1-201ENST00000506586 2021 ntBASIC4.57□□□□□ -1.68
SCAPERQ9BY12 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.57□□□□□ -1.68
SCAPERQ9BY12 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SCAPERQ9BY12 AP002088.1-201ENST00000382740 395 ntBASIC4.57□□□□□ -1.68
SCAPERQ9BY12 AC063976.3-201ENST00000426849 329 ntBASIC4.57□□□□□ -1.68
SCAPERQ9BY12 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCAPERQ9BY12 RPL7P36-201ENST00000444633 681 ntBASIC4.57□□□□□ -1.68
SCAPERQ9BY12 AC107015.1-201ENST00000466902 747 ntBASIC4.57□□□□□ -1.68
SCAPERQ9BY12 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.57□□□□□ -1.68
SCAPERQ9BY12 AC114781.4-201ENST00000513707 639 ntBASIC4.57□□□□□ -1.68
SCAPERQ9BY12 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SCAPERQ9BY12 BMS1P7-201ENST00000602440 1052 ntBASIC4.57□□□□□ -1.68
SCAPERQ9BY12 AL365503.1-201ENST00000605247 905 ntBASIC4.57□□□□□ -1.68
SCAPERQ9BY12 AC007619.2-201ENST00000605743 379 ntBASIC4.57□□□□□ -1.68
SCAPERQ9BY12 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCAPERQ9BY12 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.57□□□□□ -1.68
SCAPERQ9BY12 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCAPERQ9BY12 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SCAPERQ9BY12 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.57□□□□□ -1.68
SCAPERQ9BY12 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCAPERQ9BY12 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.56□□□□□ -1.68
SCAPERQ9BY12 RPL7P8-201ENST00000411964 730 ntBASIC4.56□□□□□ -1.68
SCAPERQ9BY12 AL159169.1-201ENST00000421119 127 ntBASIC4.56□□□□□ -1.68
SCAPERQ9BY12 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.56□□□□□ -1.68
SCAPERQ9BY12 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.56□□□□□ -1.68
SCAPERQ9BY12 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.56□□□□□ -1.68
SCAPERQ9BY12 MTCYBP19-201ENST00000517463 1124 ntBASIC4.56□□□□□ -1.68
SCAPERQ9BY12 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.56□□□□□ -1.68
SCAPERQ9BY12 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.56□□□□□ -1.68
SCAPERQ9BY12 AL512310.1-201ENST00000548639 172 ntBASIC4.56□□□□□ -1.68
SCAPERQ9BY12 AL109741.3-201ENST00000561748 592 ntBASIC4.56□□□□□ -1.68
SCAPERQ9BY12 MIR5047-201ENST00000579212 100 ntBASIC4.56□□□□□ -1.68
SCAPERQ9BY12 AC008121.2-201ENST00000614647 523 ntBASIC4.56□□□□□ -1.68
SCAPERQ9BY12 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SCAPERQ9BY12 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.56□□□□□ -1.68
SCAPERQ9BY12 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.56□□□□□ -1.68
SCAPERQ9BY12 MIR30E-201ENST00000362104 92 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 AL512430.2-201ENST00000406786 339 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 AL353692.2-201ENST00000407054 335 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.55□□□□□ -1.68
SCAPERQ9BY12 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.55□□□□□ -1.68
SCAPERQ9BY12 AC087241.4-201ENST00000612441 480 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCAPERQ9BY12 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.55□□□□□ -1.68
SCAPERQ9BY12 OR11H5P-202ENST00000641612 1325 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.55□□□□□ -1.68
SCAPERQ9BY12 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.55□□□□□ -1.68
SCAPERQ9BY12 AC019155.1-201ENST00000382242 574 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 MIR184-201ENST00000384962 84 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 RNU6-55P-201ENST00000411092 107 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 RNA5SP31-201ENST00000411144 127 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 RNU6-954P-201ENST00000411355 107 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 RANP4-201ENST00000413361 655 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.55□□□□□ -1.68
SCAPERQ9BY12 EIF2S2P4-201ENST00000461070 984 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.55□□□□□ -1.68
SCAPERQ9BY12 METTL15P1-201ENST00000481421 1045 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
SCAPERQ9BY12 USP9YP5-201ENST00000511770 630 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.55□□□□□ -1.68
SCAPERQ9BY12 AC034159.1-201ENST00000513885 583 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 IGKV2D-23-201ENST00000518179 286 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.55□□□□□ -1.68
SCAPERQ9BY12 MIR4425-201ENST00000580572 84 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 AL035413.2-201ENST00000604801 525 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 AC074140.1-201ENST00000621617 208 ntBASIC4.55□□□□□ -1.68
SCAPERQ9BY12 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCAPERQ9BY12 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCAPERQ9BY12 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCAPERQ9BY12 AC116158.1-201ENST00000560231 2129 ntBASIC4.54□□□□□ -1.68
SCAPERQ9BY12 AL049780.3-201ENST00000624612 1583 ntBASIC4.54□□□□□ -1.68
SCAPERQ9BY12 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCAPERQ9BY12 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCAPERQ9BY12 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.54□□□□□ -1.68
SCAPERQ9BY12 AL162388.1-201ENST00000450912 352 ntBASIC4.54□□□□□ -1.68
SCAPERQ9BY12 AC114967.1-201ENST00000504890 259 ntBASIC4.54□□□□□ -1.68
SCAPERQ9BY12 YWHAEP4-201ENST00000505390 198 ntBASIC4.54□□□□□ -1.68
SCAPERQ9BY12 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCAPERQ9BY12 RNU4-29P-201ENST00000515943 174 ntBASIC4.54□□□□□ -1.68
SCAPERQ9BY12 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.54□□□□□ -1.68
SCAPERQ9BY12 AP001636.2-201ENST00000525517 696 ntBASIC4.54□□□□□ -1.68
SCAPERQ9BY12 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCAPERQ9BY12 TGIF1P1-201ENST00000558095 802 ntBASIC4.54□□□□□ -1.68
SCAPERQ9BY12 HMGB3P26-201ENST00000560051 582 ntBASIC4.54□□□□□ -1.68
SCAPERQ9BY12 AC106734.1-201ENST00000568646 663 ntBASIC4.54□□□□□ -1.68
SCAPERQ9BY12 AC004825.2-201ENST00000616634 455 ntBASIC4.54□□□□□ -1.68
SCAPERQ9BY12 AC092628.2-201ENST00000622492 339 ntBASIC4.54□□□□□ -1.68
SCAPERQ9BY12 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCAPERQ9BY12 ASNSP1-201ENST00000518311 1939 ntBASIC4.53□□□□□ -1.68
SCAPERQ9BY12 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPERQ9BY12 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCAPERQ9BY12 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms