Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 snoU13.7-201ENST00000459220 104 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 RPS20P21-201ENST00000466859 343 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 SETP11-201ENST00000473027 690 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 RNA5SP497-201ENST00000516081 97 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 NDUFA5P2-201ENST00000519723 344 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AP006289.1-201ENST00000538089 277 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 MIR4443-201ENST00000585052 53 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AP001981.2-201ENST00000603241 418 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC092653.1-201ENST00000608509 531 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AP005019.3-201ENST00000620418 560 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AL049536.1-201ENST00000625043 744 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC099063.3-201ENST00000642066 185 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 AC073429.2-201ENST00000569694 1444 ntBASIC5.06□□□□□ -1.6
CDK5RAP3Q96JB5 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 OR4K15-201ENST00000305051 1216 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 SNORA70F-201ENST00000384142 135 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 MIR195-201ENST00000385194 87 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 SNORA26.8-201ENST00000391306 124 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC073264.1-201ENST00000411508 416 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC093698.1-201ENST00000423843 571 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC244035.1-201ENST00000430042 390 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC010153.1-201ENST00000432862 727 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AL360221.1-201ENST00000445989 335 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC133473.1-201ENST00000455173 299 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 RPS27AP17-201ENST00000463344 455 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 RPL37P6-202ENST00000464216 403 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC092757.1-201ENST00000467293 467 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 RPL23AP72-201ENST00000492447 435 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 MTCYBP43-201ENST00000513621 740 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC106038.2-201ENST00000520706 568 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 RPL21P7-201ENST00000557463 483 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 SULT1C2P1-202ENST00000562418 459 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AGGF1P8-201ENST00000562979 1000 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 ROCK1P1-201ENST00000573767 549 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 MIR4504-201ENST00000577413 92 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC020914.6-201ENST00000594327 272 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC083899.3-201ENST00000603413 594 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC010680.3-201ENST00000604215 520 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC024560.3-201ENST00000608482 349 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC231657.1-201ENST00000624313 397 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 AC092192.1-201ENST00000633154 1018 ntBASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
CDK5RAP3Q96JB5 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC009951.1-201ENST00000623674 2614 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC103591.2-201ENST00000265259 766 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 RPL21P132-201ENST00000331267 462 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 RNU6-374P-201ENST00000364146 108 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 Y_RNA.302-201ENST00000364997 102 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 MIR659-201ENST00000384963 97 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 RNU2-21P-201ENST00000410368 188 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 RPL7P8-201ENST00000411964 730 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC234779.1-201ENST00000425910 285 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 MED14P1-201ENST00000430517 648 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 MTND1P30-201ENST00000441241 901 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AL513533.1-201ENST00000453728 415 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 ARPC3P2-201ENST00000457786 533 ntBASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.04□□□□□ -1.6
CDK5RAP3Q96JB5 AC012158.1-204ENST00000483430 465 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms