Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 MIR3158-1-201ENST00000583596 81 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC006116.10-201ENST00000591836 581 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC018618.2-201ENST00000604770 446 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC245389.1-201ENST00000605141 529 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC011374.2-201ENST00000607135 526 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AP001033.2-201ENST00000609701 1003 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 AL445493.3-201ENST00000619568 477 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 GABPAP-201ENST00000419271 1356 ntBASIC3.33□□□□□ -1.88
HMGCS1Q01581 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMGCS1Q01581 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.33□□□□□ -1.88
HMGCS1Q01581 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMGCS1Q01581 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMGCS1Q01581 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMGCS1Q01581 RNA5SP391-201ENST00000363456 119 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 RNU6-792P-201ENST00000363490 107 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 AL359837.1-201ENST00000381357 287 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 RNU6-328P-201ENST00000390887 106 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 HNRNPDP2-201ENST00000406475 478 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 SYF2P2-201ENST00000417620 583 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC234782.4-201ENST00000417646 1048 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AL513174.1-201ENST00000423182 629 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMGCS1Q01581 AP000907.1-201ENST00000428428 510 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 RPL17P35-201ENST00000432217 549 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 ARL4AP4-201ENST00000434170 518 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 TPTE2P6-202ENST00000445572 1007 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 HMGN2P21-201ENST00000447764 270 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 RPL12P26-201ENST00000452430 487 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 RPS4XP2-201ENST00000458402 793 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 U3.44-201ENST00000458938 192 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 RPL23AP62-201ENST00000463396 453 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 SNRPGP3-201ENST00000469405 227 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 TMED11P-201ENST00000479478 690 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC092451.1-201ENST00000480211 153 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC133963.2-201ENST00000513686 578 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 RN7SKP18-201ENST00000516005 275 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 OR5AK3P-201ENST00000527486 1297 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC025260.1-201ENST00000548858 430 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC092474.3-201ENST00000603022 568 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC079880.2-201ENST00000603790 1213 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AL512506.1-201ENST00000613918 449 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC008121.2-201ENST00000614647 523 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC006133.1-201ENST00000617106 264 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC121761.2-201ENST00000617300 689 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 AL122126.1-201ENST00000546905 1318 ntBASIC3.32□□□□□ -1.88
HMGCS1Q01581 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMGCS1Q01581 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGCS1Q01581 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCS1Q01581 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCS1Q01581 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCS1Q01581 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCS1Q01581 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 AC032011.1-201ENST00000611703 1549 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 MTND4P31-201ENST00000425607 1343 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 SNORA73.2-201ENST00000364946 201 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 MTATP6P19-201ENST00000413797 659 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 TATDN1P1-201ENST00000414123 891 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 AL158825.1-201ENST00000414735 521 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 GOT2P5-201ENST00000433995 546 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 BX679664.1-201ENST00000434429 253 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 RPS27P5-201ENST00000444247 244 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 SNORD105B-201ENST00000458770 79 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 AC010401.1-201ENST00000463867 348 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 AC078785.3-201ENST00000476607 425 ntBASIC3.31□□□□□ -1.88
HMGCS1Q01581 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGCS1Q01581 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms