Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.65□□□□□ -1.83
CX3CL1P78423 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CX3CL1P78423 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CX3CL1P78423 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CX3CL1P78423 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CL1P78423 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CX3CL1P78423 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CX3CL1P78423 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.64□□□□□ -1.83
CX3CL1P78423 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CL1P78423 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.64□□□□□ -1.83
CX3CL1P78423 MTCO1P24-201ENST00000515438 1558 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
CX3CL1P78423 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CL1P78423 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CL1P78423 IQCB2P-201ENST00000401788 1633 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CL1P78423 RNA5SP52-201ENST00000362448 134 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 RNVU1-3-201ENST00000364313 161 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CX3CL1P78423 RNU6-356P-201ENST00000384140 107 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 RNU5A-2P-201ENST00000384337 116 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 SNORD116-8-201ENST00000384365 95 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.64□□□□□ -1.83
CX3CL1P78423 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.64□□□□□ -1.83
CX3CL1P78423 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 MFSD13B-201ENST00000420133 1290 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.64□□□□□ -1.83
CX3CL1P78423 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AL365203.2-201ENST00000423444 196 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.64□□□□□ -1.83
CX3CL1P78423 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.64□□□□□ -1.83
CX3CL1P78423 AL365396.1-201ENST00000430854 671 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AL359265.2-201ENST00000434367 631 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 RPL23AP74-201ENST00000437246 471 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.64□□□□□ -1.83
CX3CL1P78423 EEF1E1P1-201ENST00000446998 430 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 PPIAP3-201ENST00000450588 505 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.64□□□□□ -1.83
CX3CL1P78423 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.64□□□□□ -1.83
CX3CL1P78423 RPL12P20-201ENST00000475538 479 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 IGLV2-34-201ENST00000490007 283 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.64□□□□□ -1.83
CX3CL1P78423 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.64□□□□□ -1.83
CX3CL1P78423 MTND1P22-201ENST00000510572 951 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 LTV1P1-201ENST00000510683 1237 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CX3CL1P78423 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.64□□□□□ -1.83
CX3CL1P78423 RNU6-150P-201ENST00000516237 95 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 RNU6-232P-201ENST00000517144 64 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.64□□□□□ -1.83
CX3CL1P78423 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.64□□□□□ -1.83
CX3CL1P78423 DEFB109D-201ENST00000529497 240 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.64□□□□□ -1.83
CX3CL1P78423 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CL1P78423 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.64□□□□□ -1.83
CX3CL1P78423 OR7K1P-201ENST00000546439 926 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.64□□□□□ -1.83
CX3CL1P78423 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.64□□□□□ -1.83
CX3CL1P78423 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.64□□□□□ -1.83
CX3CL1P78423 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.64□□□□□ -1.83
CX3CL1P78423 AC008088.1-201ENST00000580993 280 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AC209154.1-201ENST00000582156 337 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AC007448.1-201ENST00000582714 234 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.64□□□□□ -1.83
CX3CL1P78423 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.64□□□□□ -1.83
CX3CL1P78423 AL133338.2-201ENST00000604292 736 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AC004223.4-201ENST00000612426 332 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CX3CL1P78423 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CX3CL1P78423 AC006971.1-201ENST00000407916 4486 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CL1P78423 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CX3CL1P78423 KARSP3-201ENST00000571212 1504 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 AC087359.1-201ENST00000508335 1740 ntBASIC3.64□□□□□ -1.83
CX3CL1P78423 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
CX3CL1P78423 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.64□□□□□ -1.83
CX3CL1P78423 DDX43P2-201ENST00000604753 1354 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 AC068254.2-201ENST00000623938 3577 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CX3CL1P78423 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CX3CL1P78423 AL133243.3-201ENST00000617415 3004 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CX3CL1P78423 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CX3CL1P78423 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CX3CL1P78423 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 AC021146.4-201ENST00000309229 279 ntBASIC3.63□□□□□ -1.83
CX3CL1P78423 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CX3CL1P78423 RNU6-1279P-201ENST00000383917 103 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms