Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
YBX1P67809 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.23□□□□□ -1.57
YBX1P67809 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
YBX1P67809 AC025125.1-201ENST00000624743 1922 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.23□□□□□ -1.57
YBX1P67809 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
YBX1P67809 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
YBX1P67809 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
YBX1P67809 OR5J1P-201ENST00000313544 939 ntBASIC5.23□□□□□ -1.57
YBX1P67809 RNU6-223P-201ENST00000362830 107 ntBASIC5.23□□□□□ -1.57
YBX1P67809 SNORA63C-201ENST00000364578 129 ntBASIC5.23□□□□□ -1.57
YBX1P67809 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
YBX1P67809 SNORA32.2-201ENST00000384049 122 ntBASIC5.23□□□□□ -1.57
YBX1P67809 RNU6-74P-201ENST00000384235 107 ntBASIC5.23□□□□□ -1.57
YBX1P67809 RPS4XP8-201ENST00000402039 771 ntBASIC5.23□□□□□ -1.57
YBX1P67809 TXNP7-201ENST00000406296 293 ntBASIC5.23□□□□□ -1.57
YBX1P67809 RNU4-34P-201ENST00000410431 124 ntBASIC5.23□□□□□ -1.57
YBX1P67809 RN7SKP140-201ENST00000411196 284 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.23□□□□□ -1.57
YBX1P67809 SNRPFP1-201ENST00000414761 252 ntBASIC5.23□□□□□ -1.57
YBX1P67809 RPS7P15-201ENST00000415804 584 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.23□□□□□ -1.57
YBX1P67809 VTI1BP4-201ENST00000427516 527 ntBASIC5.23□□□□□ -1.57
YBX1P67809 CYCSP6-201ENST00000434498 302 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.23□□□□□ -1.57
YBX1P67809 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.23□□□□□ -1.57
YBX1P67809 AC105399.1-202ENST00000447303 205 ntBASIC5.23□□□□□ -1.57
YBX1P67809 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
YBX1P67809 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.23□□□□□ -1.57
YBX1P67809 Y_RNA.632-201ENST00000459189 102 ntBASIC5.23□□□□□ -1.57
YBX1P67809 RPL23AP71-201ENST00000470966 469 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.23□□□□□ -1.57
YBX1P67809 SIAH1P1-201ENST00000479411 923 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AL161747.1-201ENST00000480068 358 ntBASIC5.23□□□□□ -1.57
YBX1P67809 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.23□□□□□ -1.57
YBX1P67809 AC108693.1-201ENST00000496068 432 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.23□□□□□ -1.57
YBX1P67809 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.23□□□□□ -1.57
YBX1P67809 RN7SKP13-201ENST00000515933 244 ntBASIC5.23□□□□□ -1.57
YBX1P67809 RNA5SP34-201ENST00000516887 130 ntBASIC5.23□□□□□ -1.57
YBX1P67809 RNA5SP230-201ENST00000517039 122 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.23□□□□□ -1.57
YBX1P67809 TRMT10BP1-201ENST00000519377 943 ntBASIC5.23□□□□□ -1.57
YBX1P67809 COX6B1P6-201ENST00000522347 255 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.23□□□□□ -1.57
YBX1P67809 AC027369.5-201ENST00000533838 755 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.23□□□□□ -1.57
YBX1P67809 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.23□□□□□ -1.57
YBX1P67809 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.23□□□□□ -1.57
YBX1P67809 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.23□□□□□ -1.57
YBX1P67809 MTCYBP13-201ENST00000578634 1093 ntBASIC5.23□□□□□ -1.57
YBX1P67809 RN7SL290P-201ENST00000578661 300 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.23□□□□□ -1.57
YBX1P67809 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.23□□□□□ -1.57
YBX1P67809 MIR3171-201ENST00000584270 74 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.23□□□□□ -1.57
YBX1P67809 FKBP1AP1-201ENST00000594588 318 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC106900.2-201ENST00000604994 317 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC008966.2-201ENST00000606157 453 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AL355802.3-201ENST00000607571 545 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC040896.1-201ENST00000613819 479 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC093913.1-201ENST00000614178 329 ntBASIC5.23□□□□□ -1.57
YBX1P67809 MIR7973-1-201ENST00000614683 76 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC037198.3-201ENST00000616754 526 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC090971.5-201ENST00000621102 293 ntBASIC5.23□□□□□ -1.57
YBX1P67809 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.23□□□□□ -1.57
YBX1P67809 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
YBX1P67809 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
YBX1P67809 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
YBX1P67809 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
YBX1P67809 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
YBX1P67809 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
YBX1P67809 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.23□□□□□ -1.57
YBX1P67809 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
YBX1P67809 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.22□□□□□ -1.57
YBX1P67809 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
YBX1P67809 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
YBX1P67809 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
YBX1P67809 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
YBX1P67809 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
YBX1P67809 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
YBX1P67809 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.22□□□□□ -1.57
YBX1P67809 RNU6-1151P-201ENST00000384684 107 ntBASIC5.22□□□□□ -1.57
YBX1P67809 RNA5SP241-201ENST00000391326 114 ntBASIC5.22□□□□□ -1.57
YBX1P67809 RPL23AP32-201ENST00000395315 459 ntBASIC5.22□□□□□ -1.57
YBX1P67809 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
YBX1P67809 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
YBX1P67809 SPTLC1P2-201ENST00000407089 121 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.22□□□□□ -1.57
YBX1P67809 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.22□□□□□ -1.57
YBX1P67809 ELOCP4-201ENST00000420090 333 ntBASIC5.22□□□□□ -1.57
YBX1P67809 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.22□□□□□ -1.57
YBX1P67809 MTCO3P46-201ENST00000425787 232 ntBASIC5.22□□□□□ -1.57
YBX1P67809 ATP5JP1-201ENST00000431631 322 ntBASIC5.22□□□□□ -1.57
YBX1P67809 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
YBX1P67809 RPL36AP53-201ENST00000432891 316 ntBASIC5.22□□□□□ -1.57
YBX1P67809 GSTM5P1-201ENST00000434751 660 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.22□□□□□ -1.57
YBX1P67809 MTND3P2-201ENST00000438452 342 ntBASIC5.22□□□□□ -1.57
YBX1P67809 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms