Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN6P56747 OSTCP5-201ENST00000425293 453 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN6P56747 TVP23BP2-201ENST00000455082 615 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 RN7SL93P-201ENST00000463035 293 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 TMED11P-201ENST00000479478 690 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 AC093663.1-201ENST00000497190 394 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN6P56747 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN6P56747 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN6P56747 SNORA31.13-201ENST00000516624 135 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN6P56747 COX6B1P6-201ENST00000522347 255 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN6P56747 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN6P56747 AC012414.2-201ENST00000559474 187 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN6P56747 CBX3P2-202ENST00000583365 535 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN6P56747 AL163642.2-201ENST00000604722 1019 ntBASIC3.39□□□□□ -1.87
CLDN6P56747 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN6P56747 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN6P56747 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN6P56747 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN6P56747 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN6P56747 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN6P56747 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN6P56747 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CLDN6P56747 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN6P56747 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN6P56747 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CLDN6P56747 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN6P56747 RNU1-18P-201ENST00000363062 164 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLDN6P56747 UBA52P6-201ENST00000399822 382 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 DNAJC19P6-201ENST00000401853 280 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN6P56747 AMD1P2-201ENST00000412936 992 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 LINC01347-201ENST00000417964 355 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN6P56747 Z75741.1-201ENST00000446793 314 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 FTH1P25-201ENST00000447665 469 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN6P56747 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN6P56747 AC006480.1-201ENST00000449887 378 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN6P56747 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN6P56747 DNAJC19P1-201ENST00000455312 319 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 RPL9P32-201ENST00000464118 620 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN6P56747 AC008562.1-201ENST00000521763 330 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN6P56747 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN6P56747 CR383656.14-201ENST00000551951 406 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN6P56747 MIR5680-201ENST00000577577 84 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 AC006270.2-201ENST00000578523 652 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN6P56747 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN6P56747 AL162274.2-201ENST00000614406 332 ntBASIC3.38□□□□□ -1.87
CLDN6P56747 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN6P56747 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
CLDN6P56747 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN6P56747 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN6P56747 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN6P56747 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN6P56747 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN6P56747 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN6P56747 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN6P56747 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN6P56747 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN6P56747 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN6P56747 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN6P56747 RNU6-40P-201ENST00000384254 107 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLDN6P56747 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN6P56747 AC063979.1-201ENST00000415539 377 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN6P56747 NUP35P2-201ENST00000416748 943 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 RPS15AP40-201ENST00000419621 391 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 RFESDP1-201ENST00000422350 461 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN6P56747 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN6P56747 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN6P56747 AL365396.1-201ENST00000430854 671 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN6P56747 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN6P56747 PPIAP17-201ENST00000438507 471 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 AL138799.3-201ENST00000438968 350 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN6P56747 HMGN2P21-201ENST00000447764 270 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 AC098824.1-201ENST00000453565 980 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 MTCO3P20-201ENST00000454926 688 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 AC096576.1-201ENST00000489014 359 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 AC078817.1-201ENST00000492623 435 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 RPL5P23-201ENST00000496040 868 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN6P56747 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.37□□□□□ -1.87
CLDN6P56747 CENPUP2-201ENST00000555897 1186 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms