Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FGF7P5-201ENST00000441829 291 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AL133547.1-201ENST00000448546 220 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AL500522.2-201ENST00000448562 343 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.97□□□□□ -1.77
PDX1P52945 HMGB3P21-201ENST00000452483 547 ntBASIC3.97□□□□□ -1.77
PDX1P52945 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.97□□□□□ -1.77
PDX1P52945 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.97□□□□□ -1.77
PDX1P52945 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.97□□□□□ -1.77
PDX1P52945 AC010469.1-201ENST00000463864 576 ntBASIC3.97□□□□□ -1.77
PDX1P52945 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.97□□□□□ -1.77
PDX1P52945 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.97□□□□□ -1.77
PDX1P52945 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDX1P52945 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.97□□□□□ -1.77
PDX1P52945 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.97□□□□□ -1.77
PDX1P52945 AC090071.1-201ENST00000507713 644 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AF186190.1-201ENST00000517470 480 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.97□□□□□ -1.77
PDX1P52945 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.97□□□□□ -1.77
PDX1P52945 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.97□□□□□ -1.77
PDX1P52945 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDX1P52945 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.97□□□□□ -1.77
PDX1P52945 AC090888.2-201ENST00000559765 1144 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AC084757.1-201ENST00000559987 490 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.97□□□□□ -1.77
PDX1P52945 AC124068.1-201ENST00000563131 678 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AC024220.1-201ENST00000603675 484 ntBASIC3.97□□□□□ -1.77
PDX1P52945 Z99289.3-201ENST00000605586 594 ntBASIC3.97□□□□□ -1.77
PDX1P52945 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.97□□□□□ -1.77
PDX1P52945 AC015813.4-201ENST00000610469 179 ntBASIC3.97□□□□□ -1.77
PDX1P52945 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDX1P52945 AC023158.2-201ENST00000614876 543 ntBASIC3.97□□□□□ -1.77
PDX1P52945 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.97□□□□□ -1.77
PDX1P52945 CR392039.5-201ENST00000623201 510 ntBASIC3.97□□□□□ -1.77
PDX1P52945 AP000676.4-201ENST00000624659 623 ntBASIC3.97□□□□□ -1.77
PDX1P52945 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.97□□□□□ -1.77
PDX1P52945 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
PDX1P52945 ZNF876P-202ENST00000398732 1485 ntBASIC3.97□□□□□ -1.77
PDX1P52945 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDX1P52945 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDX1P52945 AC109315.1-201ENST00000584143 1347 ntBASIC3.96□□□□□ -1.77
PDX1P52945 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PDX1P52945 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PDX1P52945 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PDX1P52945 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PDX1P52945 RNU4-28P-201ENST00000364739 141 ntBASIC3.96□□□□□ -1.78
PDX1P52945 RNU6-444P-201ENST00000383988 108 ntBASIC3.96□□□□□ -1.78
PDX1P52945 DSTNP4-201ENST00000399472 474 ntBASIC3.96□□□□□ -1.78
PDX1P52945 MTCO3P31-201ENST00000405526 789 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AL133264.1-201ENST00000407157 562 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AL161449.1-201ENST00000414531 1199 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AC008280.1-201ENST00000418851 412 ntBASIC3.96□□□□□ -1.78
PDX1P52945 RPL30P3-201ENST00000424262 333 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AL513175.1-201ENST00000431492 780 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.96□□□□□ -1.78
PDX1P52945 SEPT7P5-201ENST00000434048 306 ntBASIC3.96□□□□□ -1.78
PDX1P52945 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.96□□□□□ -1.78
PDX1P52945 AC105402.2-201ENST00000438503 358 ntBASIC3.96□□□□□ -1.78
PDX1P52945 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDX1P52945 AC007327.1-201ENST00000447461 264 ntBASIC3.96□□□□□ -1.78
PDX1P52945 APOOP2-201ENST00000461561 539 ntBASIC3.96□□□□□ -1.78
PDX1P52945 RPL7L1P8-201ENST00000469911 741 ntBASIC3.96□□□□□ -1.78
PDX1P52945 VPS26AP1-201ENST00000483197 979 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.96□□□□□ -1.78
PDX1P52945 AC110792.2-201ENST00000510278 224 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AC093755.1-201ENST00000512950 1023 ntBASIC3.96□□□□□ -1.78
PDX1P52945 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.96□□□□□ -1.78
PDX1P52945 AP001317.1-201ENST00000531194 960 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AC023538.1-201ENST00000534576 736 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.96□□□□□ -1.78
PDX1P52945 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.96□□□□□ -1.78
PDX1P52945 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.96□□□□□ -1.78
PDX1P52945 AC120057.2-201ENST00000571520 271 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.96□□□□□ -1.78
PDX1P52945 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.96□□□□□ -1.78
PDX1P52945 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.96□□□□□ -1.78
PDX1P52945 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDX1P52945 AC021749.1-201ENST00000604322 607 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AC113194.1-201ENST00000606037 500 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AP003392.5-201ENST00000607857 415 ntBASIC3.96□□□□□ -1.78
PDX1P52945 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.96□□□□□ -1.78
PDX1P52945 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDX1P52945 AC016588.2-201ENST00000632484 3021 ntBASIC3.96□□□□□ -1.78
PDX1P52945 XPOTP1-201ENST00000443317 2398 ntBASIC3.96□□□□□ -1.78
PDX1P52945 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDX1P52945 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
PDX1P52945 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.95□□□□□ -1.78
PDX1P52945 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.95□□□□□ -1.78
PDX1P52945 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.95□□□□□ -1.78
PDX1P52945 Z99496.1-201ENST00000469424 1477 ntBASIC3.95□□□□□ -1.78
PDX1P52945 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PDX1P52945 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDX1P52945 RNA5SP52-201ENST00000362448 134 ntBASIC3.95□□□□□ -1.78
PDX1P52945 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.95□□□□□ -1.78
PDX1P52945 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDX1P52945 MIR1179-201ENST00000408703 91 ntBASIC3.95□□□□□ -1.78
PDX1P52945 RNU2-21P-201ENST00000410368 188 ntBASIC3.95□□□□□ -1.78
PDX1P52945 HSPE1P12-201ENST00000412576 301 ntBASIC3.95□□□□□ -1.78
PDX1P52945 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.95□□□□□ -1.78
PDX1P52945 BOLA3P4-201ENST00000418151 400 ntBASIC3.95□□□□□ -1.78
PDX1P52945 AC005005.2-201ENST00000420779 380 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms