Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCN3P51790 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCN3P51790 MIR4429-201ENST00000580105 73 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCN3P51790 MIR3158-1-201ENST00000583596 81 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 AP001269.3-201ENST00000588718 329 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCN3P51790 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCN3P51790 AC073530.2-201ENST00000623987 261 ntBASIC4.39□□□□□ -1.71
CLCN3P51790 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCN3P51790 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCN3P51790 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCN3P51790 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCN3P51790 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCN3P51790 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLCN3P51790 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLCN3P51790 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CLCN3P51790 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLCN3P51790 MIR30B-201ENST00000384850 88 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 RNU6-1242P-201ENST00000391052 103 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 AC004022.2-201ENST00000413824 193 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 AC008280.1-201ENST00000418851 412 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 Z97055.1-201ENST00000419730 712 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCN3P51790 TMX2P1-201ENST00000436507 708 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCN3P51790 AC092473.1-201ENST00000441098 221 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.38□□□□□ -1.71
CLCN3P51790 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.38□□□□□ -1.71
CLCN3P51790 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.38□□□□□ -1.71
CLCN3P51790 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCN3P51790 FABP3P2-201ENST00000453169 399 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.38□□□□□ -1.71
CLCN3P51790 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCN3P51790 AP000893.1-201ENST00000474462 794 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 RN7SL323P-201ENST00000494712 295 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 AL139099.1-201ENST00000497398 403 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCN3P51790 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.38□□□□□ -1.71
CLCN3P51790 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCN3P51790 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
CLCN3P51790 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.38□□□□□ -1.71
CLCN3P51790 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCN3P51790 AC074050.1-201ENST00000563247 211 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCN3P51790 AC025588.2-201ENST00000604851 466 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLCN3P51790 AC023158.2-201ENST00000614876 543 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 AC039056.2-201ENST00000622261 511 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 AP002782.1-201ENST00000623107 614 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 AL512506.2-201ENST00000624472 458 ntBASIC4.38□□□□□ -1.71
CLCN3P51790 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
CLCN3P51790 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCN3P51790 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCN3P51790 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCN3P51790 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.38□□□□□ -1.71
CLCN3P51790 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CLCN3P51790 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLCN3P51790 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLCN3P51790 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.38□□□□□ -1.71
CLCN3P51790 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.37□□□□□ -1.71
CLCN3P51790 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.37□□□□□ -1.71
CLCN3P51790 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCN3P51790 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCN3P51790 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CLCN3P51790 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.37□□□□□ -1.71
CLCN3P51790 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLCN3P51790 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCN3P51790 NACA3P-201ENST00000359690 648 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 RNA5SP124-201ENST00000362739 110 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 SNORA62.3-201ENST00000365110 153 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CLCN3P51790 SNORD116-23-201ENST00000384645 92 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 AL121978.1-201ENST00000402778 359 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 AL512430.2-201ENST00000406786 339 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 EIF4EP1-201ENST00000422311 642 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 RPL30P3-201ENST00000424262 333 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 MTND5P25-201ENST00000430499 799 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 RPS6P15-201ENST00000431996 751 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 BMS1P19-201ENST00000433925 393 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 AC092393.1-201ENST00000439625 742 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 SETD6P1-201ENST00000444575 317 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.37□□□□□ -1.71
CLCN3P51790 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.37□□□□□ -1.71
CLCN3P51790 RPL7L1P1-201ENST00000448259 785 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 AL034418.1-201ENST00000448675 860 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 HMGB3P21-201ENST00000452483 547 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 RPS15AP1-201ENST00000457423 391 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 AC011979.1-201ENST00000472300 483 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 MTCYBP16-201ENST00000509187 1129 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 PPBPP1-201ENST00000510807 373 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.37□□□□□ -1.71
CLCN3P51790 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.37□□□□□ -1.71
CLCN3P51790 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.37□□□□□ -1.71
CLCN3P51790 AC124068.1-201ENST00000563131 678 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 AC023813.2-201ENST00000564321 469 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 AC022968.1-201ENST00000567372 442 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 CYP4A43P-201ENST00000568156 121 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 AC022662.1-201ENST00000580252 331 ntBASIC4.37□□□□□ -1.71
CLCN3P51790 AC008088.1-201ENST00000580993 280 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms