Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.32□□□□□ -1.88
CXCL12P48061 PSMA2P1-201ENST00000526365 646 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.32□□□□□ -1.88
CXCL12P48061 AC026333.2-201ENST00000542164 106 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.32□□□□□ -1.88
CXCL12P48061 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.32□□□□□ -1.88
CXCL12P48061 AC009101.1-201ENST00000568135 242 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.32□□□□□ -1.88
CXCL12P48061 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.32□□□□□ -1.88
CXCL12P48061 AC233309.1-201ENST00000619522 751 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL12P48061 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.32□□□□□ -1.88
CXCL12P48061 CR383658.2-201ENST00000547576 1525 ntBASIC3.32□□□□□ -1.88
CXCL12P48061 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL12P48061 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
CXCL12P48061 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL12P48061 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.32□□□□□ -1.88
CXCL12P48061 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
CXCL12P48061 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL12P48061 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL12P48061 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CXCL12P48061 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL12P48061 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.31□□□□□ -1.88
CXCL12P48061 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
CXCL12P48061 AL031121.1-201ENST00000406553 254 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 RN7SKP284-201ENST00000411002 343 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.31□□□□□ -1.88
CXCL12P48061 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.31□□□□□ -1.88
CXCL12P48061 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL12P48061 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL12P48061 NANOGP6-201ENST00000429190 847 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 RPL23AP69-201ENST00000431134 458 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 PPIAP17-201ENST00000438507 471 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 AL513343.1-201ENST00000451818 792 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 MTND2P3-201ENST00000452458 470 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 AL133477.1-201ENST00000457472 514 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.31□□□□□ -1.88
CXCL12P48061 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL12P48061 IGKV2D-23-201ENST00000518179 286 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL12P48061 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL12P48061 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL12P48061 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL12P48061 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.31□□□□□ -1.88
CXCL12P48061 AC023158.1-201ENST00000561632 1025 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 AC015917.1-201ENST00000579654 510 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.31□□□□□ -1.88
CXCL12P48061 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.31□□□□□ -1.88
CXCL12P48061 AC110741.2-201ENST00000605278 268 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.31□□□□□ -1.88
CXCL12P48061 RNVU1-4-201ENST00000612985 164 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 AL157817.1-201ENST00000614264 790 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 ATP5A1P2-202ENST00000616464 443 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.31□□□□□ -1.88
CXCL12P48061 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL12P48061 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL12P48061 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CXCL12P48061 AC092079.1-201ENST00000558620 1985 ntBASIC3.31□□□□□ -1.88
CXCL12P48061 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CXCL12P48061 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CXCL12P48061 MTCO1P14-201ENST00000441695 1559 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.3□□□□□ -1.88
CXCL12P48061 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CXCL12P48061 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CXCL12P48061 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.3□□□□□ -1.88
CXCL12P48061 RNU6-40P-201ENST00000384254 107 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 MIR320B1-201ENST00000390209 79 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 MOB1AP1-201ENST00000430903 535 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.3□□□□□ -1.88
CXCL12P48061 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.3□□□□□ -1.88
CXCL12P48061 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.3□□□□□ -1.88
CXCL12P48061 AL357552.1-201ENST00000445254 415 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 RPL7P31-201ENST00000450192 724 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 DNAJC19P8-201ENST00000452887 259 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.3□□□□□ -1.88
CXCL12P48061 NPM1P17-201ENST00000479221 602 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 AC004924.1-201ENST00000480160 781 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.3□□□□□ -1.88
CXCL12P48061 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.3□□□□□ -1.88
CXCL12P48061 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.3□□□□□ -1.88
CXCL12P48061 AC108157.1-201ENST00000510511 539 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 AC005798.1-201ENST00000513715 387 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 AC026801.2-201ENST00000515352 425 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 RN7SKP83-201ENST00000516512 178 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 AC026616.1-201ENST00000523157 525 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.3□□□□□ -1.88
CXCL12P48061 AC008489.1-201ENST00000524271 483 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 MIR4672-201ENST00000583126 81 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.3□□□□□ -1.88
CXCL12P48061 AC020914.4-201ENST00000597690 277 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 AL391834.1-201ENST00000609609 560 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.3□□□□□ -1.88
CXCL12P48061 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CXCL12P48061 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CXCL12P48061 AC009313.2-201ENST00000417893 1941 ntBASIC3.3□□□□□ -1.88
CXCL12P48061 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.3□□□□□ -1.88
CXCL12P48061 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CXCL12P48061 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms