Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC099677.3-201ENST00000427081 395 ntBASIC6.45□□□□□ -1.38
RFX1P22670 SAR1AP4-201ENST00000429225 591 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.45□□□□□ -1.38
RFX1P22670 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.45□□□□□ -1.38
RFX1P22670 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RFX1P22670 AP006222.1-205ENST00000450734 457 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.45□□□□□ -1.38
RFX1P22670 CBX1P2-201ENST00000453841 458 ntBASIC6.45□□□□□ -1.38
RFX1P22670 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
RFX1P22670 AC006512.1-201ENST00000468816 291 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AC026427.2-201ENST00000506228 536 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AC103851.1-201ENST00000506833 274 ntBASIC6.45□□□□□ -1.38
RFX1P22670 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.45□□□□□ -1.38
RFX1P22670 RN7SKP288-201ENST00000516227 268 ntBASIC6.45□□□□□ -1.38
RFX1P22670 RNA5SP228-201ENST00000516232 133 ntBASIC6.45□□□□□ -1.38
RFX1P22670 RNU6-277P-201ENST00000516272 106 ntBASIC6.45□□□□□ -1.38
RFX1P22670 IGKV2-19-201ENST00000518132 283 ntBASIC6.45□□□□□ -1.38
RFX1P22670 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RFX1P22670 AC107953.1-201ENST00000522216 297 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.45□□□□□ -1.38
RFX1P22670 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.45□□□□□ -1.38
RFX1P22670 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.45□□□□□ -1.38
RFX1P22670 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX1P22670 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.45□□□□□ -1.38
RFX1P22670 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.45□□□□□ -1.38
RFX1P22670 AC091078.2-201ENST00000557145 559 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.45□□□□□ -1.38
RFX1P22670 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.45□□□□□ -1.38
RFX1P22670 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX1P22670 MIR4489-201ENST00000578869 62 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.45□□□□□ -1.38
RFX1P22670 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.45□□□□□ -1.38
RFX1P22670 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX1P22670 AC022432.1-201ENST00000595739 310 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AL161729.3-201ENST00000603533 673 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AP001005.3-201ENST00000622049 129 ntBASIC6.45□□□□□ -1.38
RFX1P22670 AL161637.1-201ENST00000622380 412 ntBASIC6.45□□□□□ -1.38
RFX1P22670 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX1P22670 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RFX1P22670 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.45□□□□□ -1.38
RFX1P22670 AC079776.5-201ENST00000641920 211 ntBASIC6.45□□□□□ -1.38
RFX1P22670 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX1P22670 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
RFX1P22670 AL592429.1-201ENST00000403909 1473 ntBASIC6.45□□□□□ -1.38
RFX1P22670 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.45□□□□□ -1.38
RFX1P22670 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX1P22670 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFX1P22670 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.45□□□□□ -1.38
RFX1P22670 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFX1P22670 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RFX1P22670 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.44□□□□□ -1.38
RFX1P22670 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 RNA5SP273-201ENST00000362484 113 ntBASIC6.44□□□□□ -1.38
RFX1P22670 RN7SKP6-201ENST00000364795 319 ntBASIC6.44□□□□□ -1.38
RFX1P22670 RNU6-39P-201ENST00000384344 107 ntBASIC6.44□□□□□ -1.38
RFX1P22670 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.44□□□□□ -1.38
RFX1P22670 MIR1178-201ENST00000408396 91 ntBASIC6.44□□□□□ -1.38
RFX1P22670 RN7SKP247-201ENST00000411094 308 ntBASIC6.44□□□□□ -1.38
RFX1P22670 RN7SKP140-201ENST00000411196 284 ntBASIC6.44□□□□□ -1.38
RFX1P22670 MTND3P8-201ENST00000412909 339 ntBASIC6.44□□□□□ -1.38
RFX1P22670 DPPA2P2-201ENST00000418220 897 ntBASIC6.44□□□□□ -1.38
RFX1P22670 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.44□□□□□ -1.38
RFX1P22670 OR4K11P-201ENST00000431829 904 ntBASIC6.44□□□□□ -1.38
RFX1P22670 IFNA20P-201ENST00000436840 528 ntBASIC6.44□□□□□ -1.38
RFX1P22670 AL138799.3-201ENST00000438968 350 ntBASIC6.44□□□□□ -1.38
RFX1P22670 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.44□□□□□ -1.38
RFX1P22670 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.44□□□□□ -1.38
RFX1P22670 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 EIF4A1P11-201ENST00000451239 222 ntBASIC6.44□□□□□ -1.38
RFX1P22670 AL445665.1-202ENST00000452436 324 ntBASIC6.44□□□□□ -1.38
RFX1P22670 AC233279.1-201ENST00000455300 423 ntBASIC6.44□□□□□ -1.38
RFX1P22670 HMGN2P26-201ENST00000463169 339 ntBASIC6.44□□□□□ -1.38
RFX1P22670 AC092865.4-201ENST00000477936 615 ntBASIC6.44□□□□□ -1.38
RFX1P22670 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.44□□□□□ -1.38
RFX1P22670 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.44□□□□□ -1.38
RFX1P22670 AC139365.2-201ENST00000517972 253 ntBASIC6.44□□□□□ -1.38
RFX1P22670 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.44□□□□□ -1.38
RFX1P22670 AP000857.1-201ENST00000532151 543 ntBASIC6.44□□□□□ -1.38
RFX1P22670 AC022404.1-201ENST00000555320 273 ntBASIC6.44□□□□□ -1.38
RFX1P22670 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.44□□□□□ -1.38
RFX1P22670 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.44□□□□□ -1.38
RFX1P22670 OR4K8P-201ENST00000578842 1048 ntBASIC6.44□□□□□ -1.38
RFX1P22670 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.44□□□□□ -1.38
RFX1P22670 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.44□□□□□ -1.38
RFX1P22670 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.44□□□□□ -1.38
RFX1P22670 AC113194.1-201ENST00000606037 500 ntBASIC6.44□□□□□ -1.38
RFX1P22670 RMST_7.1-201ENST00000621935 268 ntBASIC6.44□□□□□ -1.38
RFX1P22670 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.44□□□□□ -1.38
RFX1P22670 AC015908.5-201ENST00000623289 343 ntBASIC6.44□□□□□ -1.38
RFX1P22670 AC091925.2-201ENST00000625059 256 ntBASIC6.44□□□□□ -1.38
RFX1P22670 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFX1P22670 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms