Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ATP5LP3-201ENST00000514223 304 ntBASIC6.1□□□□□ -1.43
LIG1P18858 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.1□□□□□ -1.43
LIG1P18858 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.1□□□□□ -1.43
LIG1P18858 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.1□□□□□ -1.43
LIG1P18858 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.1□□□□□ -1.43
LIG1P18858 AC022884.2-201ENST00000578535 580 ntBASIC6.1□□□□□ -1.43
LIG1P18858 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.1□□□□□ -1.43
LIG1P18858 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 AC013553.2-201ENST00000604244 589 ntBASIC6.1□□□□□ -1.43
LIG1P18858 MIR8080-201ENST00000622224 89 ntBASIC6.1□□□□□ -1.43
LIG1P18858 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LIG1P18858 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
LIG1P18858 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LIG1P18858 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LIG1P18858 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LIG1P18858 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
LIG1P18858 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
LIG1P18858 AC090971.4-201ENST00000560291 1800 ntBASIC6.09□□□□□ -1.43
LIG1P18858 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.09□□□□□ -1.43
LIG1P18858 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.09□□□□□ -1.43
LIG1P18858 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.09□□□□□ -1.43
LIG1P18858 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.09□□□□□ -1.43
LIG1P18858 RNU6-845P-201ENST00000362578 103 ntBASIC6.09□□□□□ -1.43
LIG1P18858 Y_RNA.86-201ENST00000363020 111 ntBASIC6.09□□□□□ -1.43
LIG1P18858 RNA5SP234-201ENST00000363916 119 ntBASIC6.09□□□□□ -1.43
LIG1P18858 RNA5SP132-201ENST00000364725 118 ntBASIC6.09□□□□□ -1.43
LIG1P18858 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.09□□□□□ -1.43
LIG1P18858 RNU6-767P-201ENST00000384132 107 ntBASIC6.09□□□□□ -1.43
LIG1P18858 RPL21P67-201ENST00000402896 478 ntBASIC6.09□□□□□ -1.43
LIG1P18858 AL391361.1-201ENST00000405580 489 ntBASIC6.09□□□□□ -1.43
LIG1P18858 MIR320C1-201ENST00000408566 88 ntBASIC6.09□□□□□ -1.43
LIG1P18858 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.09□□□□□ -1.43
LIG1P18858 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.09□□□□□ -1.43
LIG1P18858 OR52B5P-201ENST00000435337 951 ntBASIC6.09□□□□□ -1.43
LIG1P18858 SNRPEP7-201ENST00000438350 220 ntBASIC6.09□□□□□ -1.43
LIG1P18858 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.09□□□□□ -1.43
LIG1P18858 RPL21P71-201ENST00000465598 459 ntBASIC6.09□□□□□ -1.43
LIG1P18858 RN7SL814P-201ENST00000487715 300 ntBASIC6.09□□□□□ -1.43
LIG1P18858 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LIG1P18858 AL049874.2-201ENST00000492636 288 ntBASIC6.09□□□□□ -1.43
LIG1P18858 NIPA2P2-201ENST00000496376 1083 ntBASIC6.09□□□□□ -1.43
LIG1P18858 AC010486.1-201ENST00000511793 424 ntBASIC6.09□□□□□ -1.43
LIG1P18858 MTND6P2-201ENST00000512226 524 ntBASIC6.09□□□□□ -1.43
LIG1P18858 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.09□□□□□ -1.43
LIG1P18858 NRBF2P4-201ENST00000520874 850 ntBASIC6.09□□□□□ -1.43
LIG1P18858 COX6B1P6-201ENST00000522347 255 ntBASIC6.09□□□□□ -1.43
LIG1P18858 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.09□□□□□ -1.43
LIG1P18858 AP000790.1-201ENST00000528891 737 ntBASIC6.09□□□□□ -1.43
LIG1P18858 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.09□□□□□ -1.43
LIG1P18858 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.09□□□□□ -1.43
LIG1P18858 HMGN1P30-201ENST00000589286 268 ntBASIC6.09□□□□□ -1.43
LIG1P18858 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.09□□□□□ -1.43
LIG1P18858 CKS1BP3-201ENST00000600888 237 ntBASIC6.09□□□□□ -1.43
LIG1P18858 AL161729.3-201ENST00000603533 673 ntBASIC6.09□□□□□ -1.43
LIG1P18858 BCRP9-201ENST00000605312 388 ntBASIC6.09□□□□□ -1.43
LIG1P18858 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.09□□□□□ -1.43
LIG1P18858 AC093788.1-201ENST00000609356 927 ntBASIC6.09□□□□□ -1.43
LIG1P18858 AC022467.1-201ENST00000614738 749 ntBASIC6.09□□□□□ -1.43
LIG1P18858 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
LIG1P18858 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.09□□□□□ -1.43
LIG1P18858 YWHAEP7-203ENST00000622054 312 ntBASIC6.09□□□□□ -1.43
LIG1P18858 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.09□□□□□ -1.43
LIG1P18858 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.09□□□□□ -1.44
LIG1P18858 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
LIG1P18858 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.44
LIG1P18858 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
LIG1P18858 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIG1P18858 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LIG1P18858 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
LIG1P18858 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
LIG1P18858 AC010329.2-201ENST00000595195 2737 ntBASIC6.08□□□□□ -1.44
LIG1P18858 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIG1P18858 DDX18P3-201ENST00000404856 2007 ntBASIC6.08□□□□□ -1.44
LIG1P18858 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIG1P18858 THAP12P5-201ENST00000405864 2275 ntBASIC6.08□□□□□ -1.44
LIG1P18858 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIG1P18858 AL512646.1-201ENST00000269395 1077 ntBASIC6.08□□□□□ -1.44
LIG1P18858 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LIG1P18858 RNY3P3-201ENST00000363816 102 ntBASIC6.08□□□□□ -1.44
LIG1P18858 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LIG1P18858 RNU6-769P-201ENST00000384407 104 ntBASIC6.08□□□□□ -1.44
LIG1P18858 Z97832.1-201ENST00000402490 328 ntBASIC6.08□□□□□ -1.44
LIG1P18858 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.08□□□□□ -1.44
LIG1P18858 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.08□□□□□ -1.44
LIG1P18858 AL445669.1-201ENST00000426743 755 ntBASIC6.08□□□□□ -1.44
LIG1P18858 CYCSP6-201ENST00000434498 302 ntBASIC6.08□□□□□ -1.44
LIG1P18858 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.08□□□□□ -1.44
LIG1P18858 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.08□□□□□ -1.44
LIG1P18858 RPL23AP16-201ENST00000441715 421 ntBASIC6.08□□□□□ -1.44
LIG1P18858 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.08□□□□□ -1.44
LIG1P18858 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.08□□□□□ -1.44
LIG1P18858 MTCO1P42-201ENST00000457379 726 ntBASIC6.08□□□□□ -1.44
LIG1P18858 RPL23AP71-201ENST00000470966 469 ntBASIC6.08□□□□□ -1.44
LIG1P18858 AC108693.1-201ENST00000496068 432 ntBASIC6.08□□□□□ -1.44
LIG1P18858 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms