Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RNA5SP21-201ENST00000410917 96 ntBASIC3.46□□□□□ -1.85
COL4A1P02462 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.46□□□□□ -1.85
COL4A1P02462 AL365396.1-201ENST00000430854 671 ntBASIC3.46□□□□□ -1.85
COL4A1P02462 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.46□□□□□ -1.85
COL4A1P02462 RAB28P3-201ENST00000448325 597 ntBASIC3.46□□□□□ -1.85
COL4A1P02462 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.46□□□□□ -1.85
COL4A1P02462 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.46□□□□□ -1.85
COL4A1P02462 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.46□□□□□ -1.85
COL4A1P02462 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.46□□□□□ -1.85
COL4A1P02462 SNORA64.4-201ENST00000516632 81 ntBASIC3.46□□□□□ -1.85
COL4A1P02462 snoU109.6-201ENST00000516831 118 ntBASIC3.46□□□□□ -1.85
COL4A1P02462 EIF5A2P1-201ENST00000564027 460 ntBASIC3.46□□□□□ -1.85
COL4A1P02462 AL035413.2-201ENST00000604801 525 ntBASIC3.46□□□□□ -1.85
COL4A1P02462 AL591516.1-201ENST00000611326 274 ntBASIC3.46□□□□□ -1.85
COL4A1P02462 AC006840.1-201ENST00000623069 542 ntBASIC3.46□□□□□ -1.85
COL4A1P02462 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
COL4A1P02462 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.46□□□□□ -1.86
COL4A1P02462 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.46□□□□□ -1.86
COL4A1P02462 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.46□□□□□ -1.86
COL4A1P02462 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL4A1P02462 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL4A1P02462 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL4A1P02462 RPL7P36-201ENST00000444633 681 ntBASIC3.46□□□□□ -1.86
COL4A1P02462 AP000936.2-201ENST00000447151 681 ntBASIC3.46□□□□□ -1.86
COL4A1P02462 DNAJC19P8-201ENST00000452887 259 ntBASIC3.46□□□□□ -1.86
COL4A1P02462 SRIP1-201ENST00000489235 288 ntBASIC3.46□□□□□ -1.86
COL4A1P02462 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.46□□□□□ -1.86
COL4A1P02462 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.46□□□□□ -1.86
COL4A1P02462 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL4A1P02462 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.46□□□□□ -1.86
COL4A1P02462 RPL23AP92-201ENST00000603609 255 ntBASIC3.46□□□□□ -1.86
COL4A1P02462 MIR6715A-201ENST00000615929 79 ntBASIC3.46□□□□□ -1.86
COL4A1P02462 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
COL4A1P02462 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
COL4A1P02462 PROS2P-201ENST00000474651 1951 ntBASIC3.45□□□□□ -1.86
COL4A1P02462 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL4A1P02462 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
COL4A1P02462 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL4A1P02462 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.45□□□□□ -1.86
COL4A1P02462 AC005183.1-201ENST00000603687 1979 ntBASIC3.45□□□□□ -1.86
COL4A1P02462 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL4A1P02462 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL4A1P02462 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL4A1P02462 AL139039.1-201ENST00000401900 692 ntBASIC3.45□□□□□ -1.86
COL4A1P02462 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.45□□□□□ -1.86
COL4A1P02462 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC3.45□□□□□ -1.86
COL4A1P02462 RPL21P112-201ENST00000434403 463 ntBASIC3.45□□□□□ -1.86
COL4A1P02462 AC233982.1-201ENST00000451247 436 ntBASIC3.45□□□□□ -1.86
COL4A1P02462 AC111000.2-201ENST00000507775 550 ntBASIC3.45□□□□□ -1.86
COL4A1P02462 IGLVIV-53-201ENST00000520107 367 ntBASIC3.45□□□□□ -1.86
COL4A1P02462 AC103783.1-201ENST00000520506 373 ntBASIC3.45□□□□□ -1.86
COL4A1P02462 AC116158.1-201ENST00000560231 2129 ntBASIC3.45□□□□□ -1.86
COL4A1P02462 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL4A1P02462 MIR9-1-201ENST00000385198 89 ntBASIC3.44□□□□□ -1.86
COL4A1P02462 RPL32P35-201ENST00000415214 394 ntBASIC3.44□□□□□ -1.86
COL4A1P02462 MYL8P-204ENST00000431574 518 ntBASIC3.44□□□□□ -1.86
COL4A1P02462 RPL23AP22-201ENST00000437556 453 ntBASIC3.44□□□□□ -1.86
COL4A1P02462 RPS29P6-201ENST00000438196 145 ntBASIC3.44□□□□□ -1.86
COL4A1P02462 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.44□□□□□ -1.86
COL4A1P02462 AC093663.2-201ENST00000484625 313 ntBASIC3.44□□□□□ -1.86
COL4A1P02462 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.44□□□□□ -1.86
COL4A1P02462 AC078817.1-201ENST00000492623 435 ntBASIC3.44□□□□□ -1.86
COL4A1P02462 AC093755.1-201ENST00000512950 1023 ntBASIC3.44□□□□□ -1.86
COL4A1P02462 RN7SKP60-201ENST00000516985 239 ntBASIC3.44□□□□□ -1.86
COL4A1P02462 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL4A1P02462 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.44□□□□□ -1.86
COL4A1P02462 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.44□□□□□ -1.86
COL4A1P02462 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL4A1P02462 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.44□□□□□ -1.86
COL4A1P02462 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
COL4A1P02462 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL4A1P02462 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.43□□□□□ -1.86
COL4A1P02462 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL4A1P02462 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.43□□□□□ -1.86
COL4A1P02462 RNU6-851P-201ENST00000384565 107 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 SKINT1L-201ENST00000401057 817 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COL4A1P02462 BTF3P9-201ENST00000418784 283 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 AC063976.3-201ENST00000426849 329 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 AL121890.1-201ENST00000435457 205 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 RPL32P28-201ENST00000443577 397 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 SEPT7P3-201ENST00000455017 621 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 RN7SL442P-201ENST00000473804 320 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.43□□□□□ -1.86
COL4A1P02462 AC091544.4-201ENST00000555268 342 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 AC106734.1-201ENST00000568646 663 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL4A1P02462 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL4A1P02462 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
COL4A1P02462 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COL4A1P02462 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
COL4A1P02462 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COL4A1P02462 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL4A1P02462 AL445213.1-201ENST00000412589 747 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 AC245054.2-201ENST00000415639 319 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 RN7SL330P-201ENST00000469709 307 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 RN7SL633P-201ENST00000488974 297 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 AC114781.4-201ENST00000513707 639 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 OR10D4P-201ENST00000525892 951 ntBASIC3.43□□□□□ -1.86
COL4A1P02462 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms